(Q38316562)

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Global analysis of the relationship between the binding of the Bas1p transcription factor and meiosis-specific double-strand DNA breaks in Saccharomyces cerevisiae

scientific article published on February 2006

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Europe PubMed Central

PMC publication ID

2 September 2017

Global analysis of the relationship between the binding of the Bas1p transcription factor and meiosis-specific double-strand DNA breaks in Saccharomyces cerevisiae (English)

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Europe PubMed Central

PMC publication ID

2 September 2017

Saccharomyces cerevisiae

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Piotr A Mieczkowski

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Piotr A Mieczkowski

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5

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Jason D Lieb

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Europe PubMed Central

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2 September 2017

author name string

Margaret Dominska

2

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Europe PubMed Central

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2 September 2017

Michael J Buck

3

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Europe PubMed Central

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2 September 2017

Jennifer L Gerton

4

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2 September 2017

Thomas D Petes

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2 September 2017

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publication date

1 February 2006

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Europe PubMed Central

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2 September 2017

Molecular and Cellular Biology

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2 September 2017

26

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Europe PubMed Central

PMC publication ID

2 September 2017

3

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

1014-1027

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data

1 reference

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1 reference

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Gene conversion and crossing over along the 405-kb left arm of Saccharomyces cerevisiae chromosome VII.

1 reference

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6 September 2017

Transcriptional regulatory code of a eukaryotic genome

1 reference

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6 September 2017

Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae

1 reference

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6 September 2017

Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis

1 reference

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6 September 2017

Where the crossovers are: recombination distributions in mammals.

1 reference

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6 September 2017

Roles of histone acetylation and chromatin remodeling factor in a meiotic recombination hotspot.

1 reference

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6 September 2017

ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments

1 reference

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6 September 2017

Physical and functional interactions among basic chromosome organizational features govern early steps of meiotic chiasma formation

1 reference

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6 September 2017

Context dependence of meiotic recombination hotspots in yeast: the relationship between recombination activity of a reporter construct and base composition

1 reference

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6 September 2017

Transcriptional regulatory networks in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments

1 reference

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6 September 2017

Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution

1 reference

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6 September 2017

Transcriptional silencing in Saccharomyces cerevisiae and Schizosaccharomyces pombe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Meiotic recombination frequencies are affected by nutritional states in Saccharomycescerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Yeast AMP pathway genes respond to adenine through regulated synthesis of a metabolic intermediate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Meiotic recombination hot spots and cold spots

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

RAP, RAP, open up! New wrinkles for RAP1 in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Control of meiotic recombination and gene expression in yeast by a simple repetitive DNA sequence that excludes nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Chromosome size-dependent control of meiotic reciprocal recombination in Saccharomyces cerevisiae: the role of crossover interference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Use of a recombination reporter insert to define meiotic recombination domains on chromosome III of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Role of the myb-like protein bas1p in Saccharomyces cerevisiae: a proteome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Synthesis of glutamine, glycine and 10-formyl tetrahydrofolate is coregulated with purine biosynthesis in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Histone acetyltransferase activity of yeast Gcn5p is required for the activation of target genes in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Position- and orientation-independent activity of the Schizosaccharomyces pombe meiotic recombination hot spot M26.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Evidence that complex formation by Bas1p and Bas2p (Pho2p) unmasks the activation function of Bas1p in an adenine-repressible step of ADE gene transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Clustering of meiotic double-strand breaks on yeast chromosome III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Meiosis-specific DNA double-strand breaks are catalyzed by Spo11, a member of a widely conserved protein family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Physical detection of heteroduplexes during meiotic recombination in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Transcription factors are required for the meiotic recombination hotspot at the HIS4 locus in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Meiosis-specific double-strand DNA breaks at the HIS4 recombination hot spot in the yeast Saccharomyces cerevisiae: control in cis and trans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Factors that affect the location and frequency of meiosis-induced double-strand breaks in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

GCN4 protein, a positive transcription factor in yeast, binds general control promoters at all 5' TGACTC 3' sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Multiple global regulators control HIS4 transcription in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Meiotic recombination between repeated transposable elements in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

BAS1 has a Myb motif and activates HIS4 transcription only in combination with BAS2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

DNA-binding protein RAP1 stimulates meiotic recombination at the HIS4 locus in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

RAP1 is required for BAS1/BAS2- and GCN4-dependent transcription of the yeast HIS4 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Coregulation of purine and histidine biosynthesis by the transcriptional activators BAS1 and BAS2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Simple Mendelian inheritance of the reiterated ribosomal DNA of yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

6 September 2017

Nucleosome position-dependent and -independent activation of HIS7 epression in Saccharomyces cerevisiae by different transcriptional activators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

14 September 2017

Meiotic recombination hotspots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

27 September 2017

Cohesin relocation from sites of chromosomal loading to places of convergent transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

23 June 2018

Limitations of silencing at native yeast telomeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

23 June 2018

The Tn3 beta-lactamase gene acts as a hotspot for meiotic recombination in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

23 June 2018

The compact chromatin structure of a Ty repeated sequence suppresses recombination hotspot activity in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

31 August 2018

Association of Mre11p with double-strand break sites during yeast meiosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

31 August 2018

Identification of a novel one-carbon metabolism regulon in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

31 August 2018

Relationship between G+C content, ORF-length and mRNA concentration in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

31 August 2018

Redox regulation of AMP synthesis in yeast: a role of the Bas1p and Bas2p transcription factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347019

31 August 2018

A promoter deletion reduces the rate of mitotic, but not meiotic, recombination at the HIS4 locus in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Meiosis-induced double-strand break sites determined by yeast chromatin structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Patterns of meiotic double-strand breakage on native and artificial yeast chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amino acid and adenine cross-pathway regulation act through the same 5'-TGACTC-3' motif in the yeast HIS7 promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct Coupling Between Meiotic DNA Replication and Recombination Initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A yeast centromere acts in cis to inhibit meiotic gene conversion of adjacent sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cohesins bind to preferential sites along yeast chromosome III, with differential regulation along arms versus the centric region

1 reference

https://pubmed.ncbi.nlm.nih.gov/16428454

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.26.3.1014-1027.2006

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

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