(Q38319596)

2 September 2017

Computational design and experimental validation of oligonucleotide-sensing allosteric ribozymes (English)

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2 September 2017

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2

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2 September 2017

Robert Penchovsky

1

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PubMed ID

16244657

2 September 2017

language of work or name

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23 October 2005

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2 September 2017

10

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inferred from page(s)

published in

Nature Biotechnology

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2 September 2017

23

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2 September 2017

1424-1433

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2 September 2017

11

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https://scigraph.springernature.com/pub.10.1038/nbt1155

2 September 2017

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Sensing Small Molecules by Nascent RNA

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Metabolite-binding RNA domains are present in the genes of eukaryotes

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Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR

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Genetic control by metabolite-binding riboswitches

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Riboswitches: the oldest mechanism for the regulation of gene expression?

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Gene regulation by riboswitches

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Ribozyme gene therapy: applications for molecular medicine

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Controlling gene expression in living cells through small molecule-RNA interactions.

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Inducible regulation of the S. cerevisiae cell cycle mediated by an RNA aptamer-ligand complex

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A theophylline responsive riboswitch based on helix slipping controls gene expression in vivo

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Genetic screens and selections for small molecules based on a synthetic riboswitch that activates protein translation

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Engineered allosteric ribozymes as biosensor components

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A novel strategy for selection of allosteric ribozymes yields RiboReporter sensors for caffeine and aspartame

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ADP-specific sensors enable universal assay of protein kinase activity

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Deoxyribozyme-based half-adder.

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A deoxyribozyme-based molecular automaton

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Rational design of allosteric ribozymes

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Cooperative binding of effectors by an allosteric ribozyme

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Engineering precision RNA molecular switches

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Allosteric selection of ribozymes that respond to the second messengers cGMP and cAMP.

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In vitro selection of ribozymes dependent on peptides for activity

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Construction of new ribozymes requiring short regulator oligonucleotides as a cofactor

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Allosteric hammerhead ribozyme TRAPs

21 January 2018

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Deoxyribozyme-based logic gates

21 January 2018

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A general approach for the use of oligonucleotide effectors to regulate the catalysis of RNA-cleaving ribozymes and DNAzymes

21 January 2018

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The equilibrium partition function and base pair binding probabilities for RNA secondary structure

21 January 2018

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RNA multi-structure landscapes. A study based on temperature dependent partition functions.

21 January 2018

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Exploring the folding landscape of a structured RNA

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RNA folding: models and perspectives

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RNA folding at elementary step resolution

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Design of multistable RNA molecules

21 January 2018

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Numbering system for the hammerhead

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Characterization of a native hammerhead ribozyme derived from schistosomes

21 January 2018

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Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

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Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity

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A glycine-dependent riboswitch that uses cooperative binding to control gene expression

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DNA library design for molecular computation

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Allosteric nucleic acid catalysts

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Fast Cleavage Kinetics of a Natural Hammerhead Ribozyme

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Nucleic Acid Selection and the Challenge of Combinatorial Chemistry

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7 January 2021

Simultaneous detection of diverse analytes with an aptazyme ligase array

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7 January 2021

Folding mechanisms of group I ribozymes: role of stability and contact order

1 reference

7 January 2021

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

1 reference

7 January 2021

https://api.fatcat.wiki/v0/release/w3pxbzfgm5a7rgyj7n2dvdovve

Identifiers

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30 July 2022

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1014281436

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Fatcat ID

release_w3pxbzfgm5a7rgyj7n2dvdovve

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https://api.fatcat.wiki/v0/release/w3pxbzfgm5a7rgyj7n2dvdovve

30 July 2022

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https://api.fatcat.wiki/v0/release/w3pxbzfgm5a7rgyj7n2dvdovve

30 July 2022