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RNA folding: models and perspectives
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
review article
1 reference
stated in
Europe PubMed Central
title
RNA folding: models and perspectives
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
author
Tobin R. Sosnick
series ordinal
1
object named as
Tobin R Sosnick
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
author name string
Tao Pan
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
publication date
1 June 2003
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
published in
Current Opinion in Structural Biology
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
volume
13
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
issue
3
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
page(s)
309-316
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
cites work
Folding of a nascent polypeptide chain in vitro: cooperative formation of structure in a protein module.
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Co-translational Folding of an Eukaryotic Multidomain Protein in a Prokaryotic Translation System
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Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.
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Facilitation of Group I Splicing in Vivo: Misfolding of the Tetrahymena IVS and the Role of Ribosomal RNA Exons
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7 January 2021
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Monitoring intermediate folding states of the td group I intron in vivo
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7 January 2021
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A mechanistic framework for co-transcriptional folding of the HDV genomic ribozyme in the presence of downstream sequence
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7 January 2021
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Pathway modulation, circular permutation and rapid RNA folding under kinetic control
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Fast folding of a ribozyme by stabilizing core interactions: evidence for multiple folding pathways in RNA.
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7 January 2021
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Probing the folding landscape of the Tetrahymena ribozyme: commitment to form the native conformation is late in the folding pathway.
1 reference
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Crossref
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7 January 2021
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Role of counterion condensation in folding of the Tetrahymena ribozyme. II. Counterion-dependence of folding kinetics
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Crossref
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7 January 2021
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Exploring the folding landscape of a structured RNA
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Crossref
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7 January 2021
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Monovalent cations mediate formation of native tertiary structure of the Tetrahymena thermophila ribozyme.
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7 January 2021
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New roles for structure in biology and drug discovery
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Crossref
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7 January 2021
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A collapsed non-native RNA folding state
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7 January 2021
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Mg2+-dependent compaction and folding of yeast tRNAPhe and the catalytic domain of the B. subtilis RNase P RNA determined by small-angle X-ray scattering
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7 January 2021
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Rapid compaction during RNA folding
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reference URL
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7 January 2021
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RNA Folding at Millisecond Intervals by Synchrotron Hydroxyl Radical Footprinting
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7 January 2021
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Intermediates and kinetic traps in the folding of a large ribozyme revealed by circular dichroism and UV absorbance spectroscopies and catalytic activity
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7 January 2021
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The rate-limiting step in the folding of a large ribozyme without kinetic traps
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Crossref
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Beyond kinetic traps in RNA folding
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7 January 2021
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Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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inferred from DOI database lookup
Mg2+-dependent folding of a large ribozyme without kinetic traps
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Molecular collapse: the rate-limiting step in two-state cytochrome c folding
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7 January 2021
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A surprising simplicity to protein folding.
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reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Folding mechanisms of group I ribozymes: role of stability and contact order
1 reference
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Crossref
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7 January 2021
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Contact order, transition state placement and the refolding rates of single domain proteins.
1 reference
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7 January 2021
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Productive folding to the native state by a group II intron ribozyme
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7 January 2021
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Multiple folding pathways for the P4-P6 RNA domain
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7 January 2021
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Folding Mechanism of theTetrahymenaRibozyme P4−P6 Domain†
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Crossref
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7 January 2021
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Effect of point mutations on the folding of globular proteins
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Crossref
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7 January 2021
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inferred from DOI database lookup
An early transition state for folding of the P4-P6 RNA domain
1 reference
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Crossref
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7 January 2021
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Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.
1 reference
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Crossref
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A thermodynamic framework and cooperativity in the tertiary folding of a Mg2+-dependent ribozyme
1 reference
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Magnesium-dependent folding of self-splicing RNA: exploring the link between cooperativity, thermodynamics, and kinetics
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Role of counterion condensation in folding of the Tetrahymena ribozyme. I. Equilibrium stabilization by cations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The linkage between magnesium binding and RNA folding.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The thermodynamic origin of the stability of a thermophilic ribozyme.
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Ligand-induced conformational changes observed in single RNA molecules
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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A Single-Molecule Study of RNA Catalysis and Folding
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Correlating structural dynamics and function in single ribozyme molecules
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Reversible unfolding of single RNA molecules by mechanical force
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
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Comparison of a QM/MM force field and molecular mechanics force fields in simulations of alanine and glycine "dipeptides" (Ace-Ala-Nme and Ace-Gly-Nme) in water in relation to the problem of modeling the unfolded peptide backbone in solution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
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RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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A compact RNA tertiary structure contains a buried backbone-K+ complex
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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A thermodynamic framework for Mg2+ binding to RNA.
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Brownian-dynamics simulations of metal-ion binding to four-way junctions
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Effects of magnesium ions on the stabilization of RNA oligomers of defined structures
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
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Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
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Exploration of the transition state for tertiary structure formation between an RNA helix and a large structured RNA.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
based on heuristic
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Multiple Monovalent Ion-dependent Pathways for the Folding of the L-21 Tetrahymena thermophila Ribozyme
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Perturbed folding kinetics of circularly permuted RNAs with altered topology.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme
1 reference
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reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2803%2900066-6
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7 January 2021
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Identifiers
DOI
10.1016/S0959-440X(03)00066-6
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
PubMed ID
12831881
1 reference
stated in
Europe PubMed Central
PubMed ID
12831881
retrieved
6 August 2017
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