(Q38319977)

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Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays

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scholarly article

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Europe PubMed Central

2 September 2017

Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays (English)

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Europe PubMed Central

2 September 2017

metabolic disease

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based on heuristic

inferred from title

Alvaro Rada-Iglesias

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Europe PubMed Central

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Europe PubMed Central

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Europe PubMed Central

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Cordelia Langford

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object named as

Cordelia Langford

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Europe PubMed Central

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Fredrik Pontén

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object named as

Fredrik Pontén

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Europe PubMed Central

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object named as

Claes Wadelius

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author name string

Christoph Koch

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Gayle Clelland

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Europe PubMed Central

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Kenneth Wester

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Europe PubMed Central

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Sarah Wilcox

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Europe PubMed Central

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Oliver M Dovey

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Peter D Ellis

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Vicki L Wraight

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Europe PubMed Central

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Keith James

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Rob Andrews

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Pawandeep Dhami

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Nigel Carter

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Jan Komorowski

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publication date

12 October 2005

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Human Molecular Genetics

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3435-3447

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The enhanceosome and transcriptional synergy.

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Control of pancreas and liver gene expression by HNF transcription factors

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Long-range control of gene expression: emerging mechanisms and disruption in disease

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Distribution of NF-kappaB-binding sites across human chromosome 22

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Hepatocyte nuclear factor 4alpha controls the development of a hepatic epithelium and liver morphogenesis

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Mutations in the hepatocyte nuclear factor-4alpha gene in maturity-onset diabetes of the young (MODY1)

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Genetic variation near the hepatocyte nuclear factor-4 alpha gene predicts susceptibility to type 2 diabetes.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Regulation of a transcription factor network required for differentiation and metabolism.

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Foxa2 regulates lipid metabolism and ketogenesis in the liver during fasting and in diabetes.

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Familial combined hyperlipidemia is associated with upstream transcription factor 1 (USF1).

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Biological control through regulated transcriptional coactivators

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

High-resolution genome-wide mapping of histone modifications

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Genomic maps and comparative analysis of histone modifications in human and mouse

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

The ENCODE (ENCyclopedia Of DNA Elements) Project

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Hierarchy and positive/negative interplays of the hepatocyte nuclear factors HNF-1, -3 and -4 in the liver-specific enhancer for the human alpha-1-microglobulin/bikunin precursor

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Functional characterization of transcription factor binding sites for HNF1-alpha, HNF3-beta (FOXA2), HNF4-alpha, Sp1 and Sp3 in the human prothrombin gene enhancer

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Characterization of hepatic-specific regulatory elements in the promoter region of the human cholesterol 7alpha-hydroxylase gene

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Transcriptional regulatory mechanisms of the human apolipoprotein genes in vitro and in vivo

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Compilation of transcription regulating proteins

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Gene ontology: tool for the unification of biology

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Recruitment of histone modifications by USF proteins at a vertebrate barrier element

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Global identification of human transcribed sequences with genome tiling arrays

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Control of apolipoprotein AI gene expression through synergistic interactions between hepatocyte nuclear factors 3 and 4.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Hepatocyte nuclear factor 4alpha enhances the hepatocyte nuclear factor 1alpha-mediated activation of transcription

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Sterol regulatory element-binding protein-2 interacts with hepatocyte nuclear factor-4 to enhance sterol isomerase gene expression in hepatocytes

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Direct physical interactions between HNF-4 and Sp1 mediate synergistic transactivation of the apolipoprotein CIII promoter.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Functional association between CBP and HNF4 in trans-activation

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https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

SRC-1 and GRIP1 coactivate transcription with hepatocyte nuclear factor 4.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

TFIIB-directed transcriptional activation by the orphan nuclear receptor hepatocyte nuclear factor 4.

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Essential role in vivo of upstream stimulatory factors for a normal dietary response of the fatty acid synthase gene in the liver

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

WebLogo: A Sequence Logo Generator

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

A rapid micropreparation technique for extraction of DNA-binding proteins from limiting numbers of mammalian cells

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Antibody-based proteomics for human tissue profiling

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Insulin-mediated down-regulation of apolipoprotein A5 gene expression through the phosphatidylinositol 3-kinase pathway: role of upstream stimulatory factor

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Two initiator-like elements are required for the combined activation of the human apolipoprotein C-III promoter by upstream stimulatory factor and hepatic nuclear factor-4

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI378

21 January 2018

Identifiers

10.1093/HMG/DDI378

1 reference

Europe PubMed Central

2 September 2017

1 reference

Europe PubMed Central

2 September 2017

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