(Q38354786)

2 September 2017

title

Isolation of a local tertiary folding transition in the context of a globally folded RNA. (English)

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2 September 2017

1

Narlikar GJ

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2 September 2017

Herschlag D

2

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2 September 2017

publication date

1 August 1996

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Nature structural biology

2 September 2017

published in

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2 September 2017

volume

3

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2 September 2017

issue

8

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2 September 2017

page(s)

701-710

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Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review

2 September 2017

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GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain

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RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme

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pH dependencies of the Tetrahymena ribozyme reveal an unconventional origin of an apparent pKa.

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DNA cleavage catalysed by the ribozyme from Tetrahymena

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Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

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An ultraviolet-inducible adenosine-adenosine cross-link reflects the catalytic structure of the Tetrahymena ribozyme

31 March 2020

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Secondary structure of the circular form of the Tetrahymena rRNA intervening sequence: a technique for RNA structure analysis using chemical probes and reverse transcriptase

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Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate

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Defining the inside and outside of a catalytic RNA molecule

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An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme

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Movement of the guide sequence during RNA catalysis by a group I ribozyme

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Visualizing the higher order folding of a catalytic RNA molecule

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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Catalysis of RNA cleavage by the Tetrahymena thermophila ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site

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Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena

31 March 2020

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Comparison of binding of mixed ribose-deoxyribose analogues of CUCU to a ribozyme and to GGAGAA by equilibrium dialysis: evidence for ribozyme specific interactions with 2' OH groups

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31 March 2020

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Replacement of the conserved G.U with a G-C pair at the cleavage site of the Tetrahymena ribozyme decreases binding, reactivity, and fidelity

31 March 2020

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Dissection of the role of the conserved G.U pair in group I RNA self-splicing

31 March 2020

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Minor groove recognition of the conserved G.U pair at the Tetrahymena ribozyme reaction site

31 March 2020

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Evidence for processivity and two-step binding of the RNA substrate from studies of J1/2 mutants of the Tetrahymena ribozyme

31 March 2020

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Use of binding energy by an RNA enzyme for catalysis by positioning and substrate destabilization

31 March 2020

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Thermodynamic and activation parameters for binding of a pyrene-labeled substrate by the Tetrahymena ribozyme: docking is not diffusion-controlled and is driven by a favorable entropy change

31 March 2020

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Dominant forces in protein folding

31 March 2020

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Stereochemical course of catalysis by the Tetrahymena ribozyme

31 March 2020

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Ribozyme-catalyzed and nonenzymatic reactions of phosphate diesters: rate effects upon substitution of sulfur for a nonbridging phosphoryl oxygen atom

31 March 2020

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A positive entropy change for guanosine binding and for the chemical step in the Tetrahymena ribozyme reaction

31 March 2020

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Improved free-energy parameters for predictions of RNA duplex stability

31 March 2020

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Crystallization of ribozymes and small RNA motifs by a sparse matrix approach

31 March 2020

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Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes

31 March 2020

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Chemical synthesis of biologically active oligoribonucleotides using beta-cyanoethyl protected ribonucleoside phosphoramidites

31 March 2020

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Guanosine binding to the Tetrahymena ribozyme: thermodynamic coupling with oligonucleotide binding

31 March 2020

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Hydrogen Ion Buffers for Biological Research*

31 March 2020

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Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NSB0896-701

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2 September 2017

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