(Q38358884)

2 September 2017

Identification of bacteriophage N4 virion RNA polymerase-nucleic acid interactions in transcription complexes (English)

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2 September 2017

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Elena K Davydova

1

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2 September 2017

Irene Kaganman

series ordinal

2

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2 September 2017

Krystyna M Kazmierczak

series ordinal

3

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2 September 2017

Lucia B Rothman-Denes

series ordinal

4

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2 September 2017

language of work or name

English

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publication date

17 November 2008

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Journal of Biological Chemistry

2 September 2017

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2 September 2017

284

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2 September 2017

4

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2 September 2017

1962-1970

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describes a project that uses

2 September 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2629080/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Structural Basis for DNA-Hairpin Promoter Recognition by the Bacteriophage N4 Virion RNA Polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

X-ray crystal structure of the polymerase domain of the bacteriophage N4 virion RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Mechanism for de novo RNA synthesis and initiating nucleotide specificity by t7 RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Bacteriophage N4 virion RNA polymerase interaction with its promoter DNA hairpin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Structure of a transcribing T7 RNA polymerase initiation complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Protein-RNA interactions in the active center of transcription elongation complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Processivity of T7 RNA polymerase requires the C-terminal Phe882-Ala883-COO- or "foot".

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Lys631 residue in the active site of the bacteriophage T7 RNA polymerase. Affinity labeling and site-directed mutagenesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

The phage N4 virion RNA polymerase catalytic domain is related to single-subunit RNA polymerases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Function and structure relationships in DNA polymerases

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

N4 virion RNA polymerase sites of transcription initiation.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Bacteriophage N4-coded, virion-encapsulated DNA-dependent RNA polymerase.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Effects of substitutions in a conserved DX(2)GR sequence motif, found in many DNA-dependent nucleotide polymerases, on transcription by T7 RNA polymerase

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629080

Photoaffinity cross-linking of TaqI restriction endonuclease using an aryl azide linked to the phosphate backbone

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19015264

12 December 2020

inferred from PubMed ID database lookup

E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19015264

12 December 2020

inferred from PubMed ID database lookup

Initiation, elongation, and processivity of carboxyl-terminal mutants of T7 RNA polymerase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19015264

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1074/JBC.M807785200

1 reference

2 September 2017

1 reference

2 September 2017

PubMed publication ID

19015264

1 reference