(Q38372097)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

title

An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Emily G Hamilton

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

Nicholas A Sinnott-Armstrong

28 March 2020

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Ansuman T Satpathy

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Seung Woo Cho

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Maxwell R Mumbach

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Ava C Carter

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Anshul Kundaje

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Paul Khavari

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

William Greenleaf

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Howard Y. Chang

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

6

Sam Vesuna

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

9

Kathleen S Montine

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

20

Thomas J Montine

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

author name string

Alexandro E Trevino

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Peyton G Greenside

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Adam J Rubin

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Beijing Wu

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Arwa Kathiria

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Maya Kasowski

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Lisa A Orloff

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Viviana I Risca

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

language of work or name

1 reference

28 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

volume

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

page(s)

959-962

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nmeth.4396

28 March 2020

exact match

0 references

cites work

Landscape of monoallelic DNA accessibility in mouse embryonic stem cells and neural progenitor cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Layer-specific chromatin accessibility landscapes reveal regulatory networks in adult mouse visual cortex.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

The genetic regulatory signature of type 2 diabetes in human skeletal muscle

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

The landscape of accessible chromatin in mammalian preimplantation embryos

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Distinct Gene Regulatory Pathways for Human Innate versus Adaptive Lymphoid Cells.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Developmental Acquisition of Regulomes Underlies Innate Lymphoid Cell Functionality

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

A novel ATAC-seq approach reveals lineage-specific reinforcement of the open chromatin landscape via cooperation between BAF and p63

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Integrative analysis of 111 reference human epigenomes

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Tn5 transposase and tagmentation procedures for massively scaled sequencing projects

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

GRASP: analysis of genotype-phenotype results from 1390 genome-wide association studies and corresponding open access database

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Residual association at C9orf72 suggests an alternative amyotrophic lateral sclerosis-causing hexanucleotide repeat

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Systematic localization of common disease-associated variation in regulatory DNA

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

An integrated encyclopedia of DNA elements in the human genome

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Human-specific transcriptional networks in the brain

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Corpus callosum involvement is a consistent feature of amyotrophic lateral sclerosis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

BEDTools: a flexible suite of utilities for comparing genomic features

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

Hippocampal atrophy rates in Alzheimer disease: added value over whole brain volume measures.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623106

ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide

23 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.4396

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMETH.4396

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

28 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846090%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

PubMed publication ID

28846090

1 reference