(Q38616929)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

title

Embracing the unknown: disentangling the complexities of the soil microbiome (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

0 references

1

Noah Fierer

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

4 September 2017

language of work or name

English

0 references

publication date

21 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

Nature Reviews Microbiology

27 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

page(s)

579-590

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28824177%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nrmicro.2017.87

27 March 2020

exact match

0 references

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Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

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Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

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Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal

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Spatial scale drives patterns in soil bacterial diversity.

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Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

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The bacterial biogeography of British soils.

21 January 2018

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Soil carbon quality and nitrogen fertilization structure bacterial communities with predictable responses of major bacterial phyla

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Redox fluctuation structures microbial communities in a wet tropical soil

21 January 2018

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The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

21 January 2018

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Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

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Strong coupling of plant and fungal community structure across western Amazonian rainforests

21 January 2018

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Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide

21 January 2018

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Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest.

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Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques

21 January 2018

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Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils

21 January 2018

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Tree diversity and species identity effects on soil fungi, protists and animals are context dependent

21 January 2018

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Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

21 January 2018

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Methanogenic archaea are globally ubiquitous in aerated soils and become active under wet anoxic conditions

21 January 2018

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The generation and maintenance of diversity in microbial communities

21 January 2018

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Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale

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Relic DNA is abundant in soil and obscures estimates of soil microbial diversity.

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The under-recognized dominance of Verrucomicrobia in soil bacterial communities

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Strategies to improve reference databases for soil microbiomes

21 January 2018

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Effect of DNA extraction method on the apparent microbial diversity of soil

21 January 2018

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Diversity is the question, not the answer

21 January 2018

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Conceptual synthesis in community ecology

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil

21 January 2018

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A Latitudinal Diversity Gradient in Terrestrial Bacteria of the Genus Streptomyces

21 January 2018

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Temporal variability in soil microbial communities across land-use types

21 January 2018

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Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four Biomes

21 January 2018

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Effects of Fertilization and Sampling Time on Composition and Diversity of Entire and Active Bacterial Communities in German Grassland Soils

21 January 2018

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Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter

21 January 2018

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Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups

21 January 2018

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Phylogenetic organization of bacterial activity.

21 January 2018

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Perspectives of plant-associated microbes in heavy metal phytoremediation.

21 January 2018

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Links between ammonia oxidizer species composition, functional diversity and nitrification kinetics in grassland soils

21 January 2018

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Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

21 January 2018

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Dispersing misconceptions and identifying opportunities for the use of 'omics' in soil microbial ecology.

21 January 2018

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Unearthing the Ecology of Soil Microorganisms Using a High Resolution DNA-SIP Approach to Explore Cellulose and Xylose Metabolism in Soil

21 January 2018

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Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses.

21 January 2018

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Annotation error in public databases: misannotation of molecular function in enzyme superfamilies

21 January 2018

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Sizing up metatranscriptomics

21 January 2018

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Response and adaptation of different methanotrophic bacteria to low methane mixing ratios

21 January 2018

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Trait-based approaches for understanding microbial biodiversity and ecosystem functioning.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Predicting changes in community composition and ecosystem functioning from plant traits: revisiting the Holy Grail

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Archaea predominate among ammonia-oxidizing prokaryotes in soils

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Methodological considerations for the use of stable isotope probing in microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

The systemic imprint of growth and its uses in ecological (meta)genomics

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Stress responses of bacteria.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

The genomic basis of trophic strategy in marine bacteria

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Trait-based representation of biological nitrification: model development, testing, and predicted community composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

A coevolutionary framework for managing disease-suppressive soils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Rapidly restoring biological soil crusts and ecosystem functions in a severely disturbed desert ecosystem

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Spatial distribution of ammonia-oxidizing bacteria and archaea across a 44-hectare farm related to ecosystem functioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Structure, function and diversity of the healthy human microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Functioning of mycorrhizal associations along the mutualism-parasitism continuum

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

The Path to Personalized Medicine

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Single-cell genome sequencing: current state of the science

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Cultivation of unculturable soil bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Abundance and diversity of viruses in six Delaware soils

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Elevated abundance of bacteriophage infecting bacteria in soil

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Marine viruses--major players in the global ecosystem

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Diversity and Ecology of Viruses in Hyperarid Desert Soils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Uncovering Earth’s virome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Advances in bacteriophage-mediated control of plant pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Exploring the viral world through metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Prevalence of lysogeny among soil bacteria and presence of 16S rRNA and trzN genes in viral-community DNA.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Evidence for transfer of antibiotic-resistance genes in soil populations of streptomycetes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Horizontal gene transfer and microbial adaptation to xenobiotics: new types of mobile genetic elements and lessons from ecological studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Horizontal arsC gene transfer among microorganisms isolated from arsenic polluted soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Evidence of horizontal transfer of symbiotic genes from a Bradyrhizobium japonicum inoculant strain to indigenous diazotrophs Sinorhizobium (Ensifer) fredii and Bradyrhizobium elkanii in a Brazilian Savannah soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Comparative genomics: the bacterial pan-genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Mobile genes in the human microbiome are structured from global to individual scales.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Considering fungal:bacterial dominance in soils – Methods, controls, and ecosystem implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Examining the global distribution of dominant archaeal populations in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Soil characteristics more strongly influence soil bacterial communities than land-use type

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Soil and plant factors driving the community of soil-borne microorganisms across chronosequences of secondary succession of chalk grasslands with a neutral pH.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Integrating microbial physiology and physio-chemical principles in soils with the MIcrobial-MIneral Carbon Stabilization (MIMICS) model

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Micrometer-scale physical structure and microbial composition of soil macroaggregates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Microbial hotspots and hot moments in soil: Concept & review

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Active microorganisms in soil: Critical review of estimation criteria and approaches

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Soil biodiversity and human health

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

A theoretical analysis of microbial eco-physiological and diffusion limitations to carbon cycling in drying soils

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Back to the basics: The need for ecophysiological insights to enhance our understanding of microbial behaviour in the rhizosphere

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Protists in soil ecology and forest nutrient cycling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

Increasing aridity reduces soil microbial diversity and abundance in global drylands

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO.2017.87

7 January 2021

inferred from DOI database lookup

Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study.

1 reference

12 December 2020

Primer and platform effects on 16S rRNA tag sequencing

1 reference

12 December 2020

Identifying the microbial taxa that consistently respond to soil warming across time and space.

1 reference

12 December 2020

Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

1 reference

12 December 2020