(Q38723919)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

review article

1 reference

title

Novel Strategies for Applied Metagenomics (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Joseph P Bielawski

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Jessica M Moore-Connors

series ordinal

1

object named as

Jessica M Moore-Connors

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

4

Johan Van Limbergen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

publication date

1 March 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

Inflammatory Bowel Diseases

7 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

page(s)

709-718

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

Diversity, stability and resilience of the human gut microbiota

7 March 2020

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A human gut microbial gene catalogue established by metagenomic sequencing

21 January 2018

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21 January 2018

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Host-bacterial mutualism in the human intestine

21 January 2018

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Gut microbiome, obesity, and metabolic dysfunction

21 January 2018

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The microbiome and regulation of mucosal immunity

21 January 2018

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The gut microbiome: the role of a virtual organ in the endocrinology of the host.

21 January 2018

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The gut flora as a forgotten organ

21 January 2018

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The microbiome as a human organ.

21 January 2018

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The functional impact of the intestinal microbiome on mucosal immunity and systemic autoimmunity

21 January 2018

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The gut microbiota in IBD.

21 January 2018

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Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

21 January 2018

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Anatomical localization of commensal bacteria in immune cell homeostasis and disease

21 January 2018

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Gut microbiota: Optimal sampling of the intestinal microbiota for research

21 January 2018

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Intestinal luminal nitrogen metabolism: role of the gut microbiota and consequences for the host.

21 January 2018

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Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota

21 January 2018

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Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces

21 January 2018

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Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer.

21 January 2018

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The treatment-naive microbiome in new-onset Crohn's disease

21 January 2018

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Bacterial biogeography of the human digestive tract

21 January 2018

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Spatial variation of the colonic microbiota in patients with ulcerative colitis and control volunteers

21 January 2018

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Colonic mucosal microbiome differs from stool microbiome in cirrhosis and hepatic encephalopathy and is linked to cognition and inflammation

21 January 2018

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The relationship between faecal-associated and mucosal-associated microbiota in irritable bowel syndrome patients and healthy subjects

21 January 2018

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High throughput sequencing reveals distinct microbial populations within the mucosal and luminal niches in healthy individuals

21 January 2018

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Effects of bowel cleansing on the intestinal microbiota

21 January 2018

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Standard colonic lavage alters the natural state of mucosal-associated microbiota in the human colon

21 January 2018

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Structure, function and diversity of the healthy human microbiome

21 January 2018

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Enterotypes of the human gut microbiome

21 January 2018

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High temporal and inter-individual variation detected in the human ileal microbiota

21 January 2018

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Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

21 January 2018

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The human gut microbiome: current knowledge, challenges, and future directions

21 January 2018

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Conducting a microbiome study

21 January 2018

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Experimental and analytical tools for studying the human microbiome

21 January 2018

1 reference

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Long-term temporal analysis of the human fecal microbiota revealed a stable core of dominant bacterial species

21 January 2018

1 reference

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DNA sequencing with chain-terminating inhibitors

21 January 2018

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Next-generation sequencing technologies for environmental DNA research

21 January 2018

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Sequencing technologies - the next generation

21 January 2018

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Next-generation sequencing platforms

21 January 2018

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A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria

21 January 2018

1 reference

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Review and re-analysis of domain-specific 16S primers

21 January 2018

1 reference

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Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies

21 January 2018

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The bacterial species definition in the genomic era.

21 January 2018

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The role of ecological theory in microbial ecology.

21 January 2018

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21 January 2018

Lateral gene transfer.

1 reference

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

21 January 2018

1 reference

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Assessing and improving methods used in operational taxonomic unit-based approaches for 16S rRNA gene sequence analysis

21 January 2018

1 reference

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Lateral gene transfer and the nature of bacterial innovation

21 January 2018

1 reference

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UPARSE: highly accurate OTU sequences from microbial amplicon reads

21 January 2018

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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

21 January 2018

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

21 January 2018

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

21 January 2018

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QIIME allows analysis of high-throughput community sequencing data

21 January 2018

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

21 January 2018

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The Influence of DNA Extraction Procedure and Primer Set on the Bacterial Community Analysis by Pyrosequencing of Barcoded 16S rRNA Gene Amplicons

21 January 2018

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Basic local alignment search tool

21 January 2018

1 reference

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Search and clustering orders of magnitude faster than BLAST

21 January 2018

1 reference

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Fast and sensitive protein alignment using DIAMOND

21 January 2018

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Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

21 January 2018

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Metagenomic microbial community profiling using unique clade-specific marker genes

21 January 2018

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MEGAN analysis of metagenomic data

21 January 2018

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Metabolic reconstruction for metagenomic data and its application to the human microbiome

21 January 2018

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MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information

21 January 2018

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The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

21 January 2018

1 reference

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IMG/M: the integrated metagenome data management and comparative analysis system

21 January 2018

1 reference

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Chapter 12: Human microbiome analysis

21 January 2018

1 reference

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Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach

21 January 2018

1 reference

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Microbiota of de-novo pediatric IBD: increased Faecalibacterium prausnitzii and reduced bacterial diversity in Crohn's but not in ulcerative colitis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease

21 January 2018

1 reference

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Multivariate analyses in microbial ecology

21 January 2018

1 reference

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Supervised classification of human microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities

21 January 2018

1 reference

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BioMiCo: a supervised Bayesian model for inference of microbial community structure.

21 January 2018

1 reference

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From next-generation sequencing to systematic modeling of the gut microbiome

21 January 2018

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Comparative analysis of functional metagenomic annotation and the mappability of short reads

21 January 2018

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Fungi and inflammatory bowel diseases: Alterations of composition and diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

Gut fungal microbiota: the Yin and Yang of inflammatory bowel disease

21 January 2018

1 reference

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The mycobiota: interactions between commensal fungi and the host immune system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

Interactions between commensal fungi and the C-type lectin receptor Dectin-1 influence colitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

The fungal microbiota of de-novo paediatric inflammatory bowel disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease.

21 January 2018

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Fungal community analysis by high-throughput sequencing of amplified markers--a user's guide

21 January 2018

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Viruses in the faecal microbiota of monozygotic twins and their mothers

21 January 2018

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The human gut virome: inter-individual variation and dynamic response to diet

21 January 2018

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Semisynthetic diet ameliorates Crohn's disease-like ileitis in TNFΔARE/WT mice through antigen-independent mechanisms of gluten

21 January 2018

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Disease-specific alterations in the enteric virome in inflammatory bowel disease

21 January 2018

1 reference

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Characterization of virus-like particles associated with the human faecal and caecal microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1097%2FMIB.0000000000000717

Evaluation of methods to purify virus-like particles for metagenomic sequencing of intestinal viromes

21 January 2018

1 reference

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10.1097/MIB.0000000000000717

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26848519%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference