(Q38910337)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28289288%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

title

3D structures of individual mammalian genomes studied by single-cell Hi-C (English)

1 reference

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5 April 2020

15

1 reference

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5 April 2020

Tim J Stevens

1

1 reference

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5 April 2020

David Lando

2

1 reference

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5 April 2020

Srinjan Basu

3

1 reference

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5 April 2020

Kai J Wohlfahrt

8

1 reference

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5 April 2020

Andre J Faure

12

1 reference

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5 April 2020

Matthieu Palayret

17

1 reference

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5 April 2020

Luciano Di Croce

19

1 reference

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5 April 2020

Brian Hendrich

21

1 reference

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5 April 2020

Ernest D. Laue

23

1 reference

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5 April 2020

20

Anton Wutz

1 reference

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5 April 2020

author name string

Liam P Atkinson

4

1 reference

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5 April 2020

Yang Cao

5

1 reference

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5 April 2020

Steven F Lee

6

1 reference

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5 April 2020

Martin Leeb

7

1 reference

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5 April 2020

Wayne Boucher

9

1 reference

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5 April 2020

Aoife O'Shaughnessy-Kirwan

10

1 reference

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5 April 2020

Julie Cramard

11

1 reference

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5 April 2020

Meryem Ralser

13

1 reference

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5 April 2020

Enrique Blanco

14

1 reference

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5 April 2020

Miriam Sansó

16

1 reference

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5 April 2020

Ben Lehner

18

1 reference

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5 April 2020

Dave Klenerman

22

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5 April 2020

language of work or name

English

0 references

publication date

13 March 2017

1 reference

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5 April 2020

1 reference

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5 April 2020

volume

544

1 reference

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5 April 2020

issue

7648

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28289288%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

page(s)

59-64

1 reference

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Spatial organization of chromatin domains and compartments in single chromosomes

5 April 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Structural organization of the inactive X chromosome in the mouse.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Formation of Chromosomal Domains by Loop Extrusion.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

The Nucleosome Remodeling and Deacetylase Complex NuRD Is Built from Preformed Catalytically Active Sub-modules

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Population-based 3D genome structure analysis reveals driving forces in spatial genome organization.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

NANOG alone induces germ cells in primed epiblast in vitro by activation of enhancers

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Nuclear Architecture Organized by Rif1 Underpins the Replication-Timing Program

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Stable Chromosome Condensation Revealed by Chromosome Conformation Capture

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Chromosomes. A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

The 4D nucleome: Evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Genetic organization of interphase chromosome bands and interbands in Drosophila melanogaster

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Organization of the mitotic chromosome

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Cohesin-mediated interactions organize chromosomal domain architecture

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Human genome replication proceeds through four chromatin states.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

The pluripotent genome in three dimensions is shaped around pluripotency factors

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Architectural protein subclasses shape 3D organization of genomes during lineage commitment

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Single-cell dynamics of genome-nuclear lamina interactions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Genome architecture: domain organization of interphase chromosomes

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Transcription-dependent dynamic supercoiling is a short-range genomic force

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Spatial partitioning of the regulatory landscape of the X-inactivation centre

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Topological domains in mammalian genomes identified by analysis of chromatin interactions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Spatial organization of the mouse genome and its role in recurrent chromosomal translocations

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Three-dimensional folding and functional organization principles of the Drosophila genome

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Cohesin relocation from sites of chromosomal loading to places of convergent transcription

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Comprehensive single cell-resolution analysis of the role of chromatin regulators in early C. elegans embryogenesis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Defining an essential transcription factor program for naïve pluripotency

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

Klf4 organizes long-range chromosomal interactions with the oct4 locus in reprogramming and pluripotency.

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5385134

22 August 2018

Identifiers

DOI

10.1038/NATURE21429

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28289288%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28289288%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

PubMed publication ID

28289288

1 reference