(Q38932728)

7 September 2017

title

Functional genomics in a non-model crop: transcriptomics or proteomics? (English)

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7 September 2017

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Nancy Podevin

3

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Hideo Matsumura

object named as

Hideo Matsumura

6

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Sebastien Carpentier

object named as

Sebastien Christian Carpentier

1

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Kris Laukens

object named as

Kris Laukens

4

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author name string

Bert Coemans

2

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7 September 2017

Erwin Witters

5

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7 September 2017

Ryohei Terauchi

7

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7 September 2017

Rony Swennen

8

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7 September 2017

Bart Panis

9

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7 September 2017

publication date

25 February 2008

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7 September 2017

published in

Physiologia Plantarum

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7 September 2017

volume

133

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7 September 2017

issue

2

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7 September 2017

page(s)

117-130

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 September 2017

cites work

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https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Isoelectric focusing in immobilized pH gradients: Principle, methodology and some applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Gene expression analysis by cDNA-AFLP highlights a set of new signaling networks and translational control during seed dormancy breaking in Nicotiana plumbaginifolia

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Comparative environmental genomics in non-model species: using heterologous hybridization to DNA-based microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Preparation of protein extracts from recalcitrant plant tissues: an evaluation of different methods for two-dimensional gel electrophoresis analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Banana (Musa spp.) as a model to study the meristem proteome: acclimation to osmotic stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Toward a protein profile of Escherichia coli: comparison to its transcription profile

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Genetic basis of proteome variation in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Comparing protein abundance and mRNA expression levels on a genomic scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Correlation between protein and mRNA abundance in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Identification of differentially expressed genes by restriction endonuclease-based gene expression fingerprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Description of the entire mRNA population by a 3' end cDNA fragment generated by class IIS restriction enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

A simple method for displaying the hydropathic character of a protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Insights into the relation between mrna and protein expression patterns: II. Experimental observations in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Comparative bioinformatic analysis of complete proteomes and protein parameters for cross-species identification in proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Direct analysis of protein complexes using mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

High density synthetic oligonucleotide arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Genomics, gene expression and DNA arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Better approaches to finding the needle in a haystack: optimizing proteome analysis through automation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Post-transcriptional control of gene expression: a genome-wide perspective.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Evaluation of proteome reference maps for cross-species identification of proteins by peptide mass fingerprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Gene expression analysis of plant host-pathogen interactions by SuperSAGE

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

SuperSAGE array: the direct use of 26-base-pair transcript tags in oligonucleotide arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

An efficient solubilization buffer for plant proteins focused in immobilized pH gradients

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Insights into the relation between mRNA and protein expression patterns: I. Theoretical considerations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Approaches for the quantification of protein concentration ratios

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca 7000 full-length cDNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Heterogeneity in polyadenylation cleavage sites in mammalian mRNA sequences: implications for SAGE analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Primary amine coding as a path to comparative proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Prefractionation techniques in proteome analysis: the mining tools of the third millennium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Functional proteome analysis of the banana plant (Musa spp.) using de novo sequence analysis of derivatized peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Membrane proteins and proteomics: un amour impossible?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Whole proteome pI values correlate with subcellular localizations of proteins for organisms within the three domains of life.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Gene expression analysis by transcript profiling coupled to a gene database query

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Arrays of complementary oligonucleotides for analysing the hybridisation behaviour of nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

A quantitative evaluation of SAGE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Integrated genomic and proteomic analyses of gene expression in Mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Transcript identification by analysis of short sequence tags--influence of tag length, restriction site and transcript database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Serial analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Applying the SAGE technique to study the effects of electromagnetic field on biological systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Cross-species protein identification using amino acid composition, peptide mass fingerprinting, isoelectric point and molecular mass: a theoretical evaluation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Two-dimensional gel electrophoresis for proteome projects: the effects of protein hydrophobicity and copy number

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Fast liquid chromatography coupled to electrospray tandem mass spectrometry peptide sequencing for cross-species protein identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Polyethylene glycol fractionation improved detection of low-abundant proteins by two-dimensional electrophoresis analysis of plant proteome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

Flow cytometric analysis of nuclear DNA content in Musa

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1399-3054.2008.01069.X

10.1111/J.1399-3054.2008.01069.X

21 January 2018

Identifiers

DOI

1 reference

7 September 2017

1 reference