(Q38961658)

English

Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana).

scientific article published on 22 September 2015

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scholarly article

1 reference

Europe PubMed Central

8 September 2017

Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana). (English)

1 reference

Europe PubMed Central

8 September 2017

0 references

Astrid Deschênes

object named as

Astrid Deschênes

3

0 references

6

object named as

Jean Bousquet

1 reference

Europe PubMed Central

8 September 2017

5

object named as

Jean Beaulieu

1 reference

Europe PubMed Central

8 September 2017

author name string

Nathalie Pavy

1

1 reference

Europe PubMed Central

8 September 2017

France Gagnon

2

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Europe PubMed Central

8 September 2017

Brian Boyle

4

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Europe PubMed Central

8 September 2017

publication date

22 September 2015

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Europe PubMed Central

8 September 2017

Molecular Ecology Resources

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Europe PubMed Central

8 September 2017

16

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Europe PubMed Central

8 September 2017

2

1 reference

Europe PubMed Central

8 September 2017

588-598

1 reference

Europe PubMed Central

8 September 2017

Genomic selection accuracies within and between environments and small breeding groups in white spruce.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Development and validation of a 20K single nucleotide polymorphism (SNP) whole genome genotyping array for apple (Malus × domestica Borkh).

1 reference

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21 January 2018

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data

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21 January 2018

Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies

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Trans-species shared polymorphisms at orthologous nuclear gene loci among distant species in the conifer Picea (Pinaceae): implications for the long-term maintenance of genetic diversity in trees

1 reference

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21 January 2018

Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant.

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21 January 2018

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

1 reference

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21 January 2018

Development of genetic markers in Eucalyptus species by target enrichment and exome sequencing

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21 January 2018

Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grass Panicum virgatum

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21 January 2018

A 34K SNP genotyping array forPopulus trichocarpa: Design, application to the study of natural populations and transferability to otherPopulusspecies

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21 January 2018

The development and characterization of a 60K SNP chip for chicken.

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Whole-genome genotyping on bead arrays

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Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing

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A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation.

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21 January 2018

Near-saturated and complete genetic linkage map of black spruce (Picea mariana).

1 reference

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21 January 2018

A high-density genetic linkage map of a black spruce (Picea mariana) × red spruce (Picea rubens) interspecific hybrid.

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21 January 2018

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

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21 January 2018

MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping

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21 January 2018

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

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21 January 2018

SNP discovery in wild and domesticated populations of blue catfish, Ictalurus furcatus, using genotyping-by-sequencing and subsequent SNP validation

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21 January 2018

SNP markers and their impact on plant breeding

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Molecular evolution of regulatory genes in spruces from different species and continents: heterogeneous patterns of linkage disequilibrium and selection but correlated recent demographic changes

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Whole-exome targeted sequencing of the uncharacterized pine genome

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

The Norway spruce genome sequence and conifer genome evolution

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21 January 2018

The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Optimization of the genotyping-by-sequencing strategy for population genomic analysis in conifers.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce

1 reference

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21 January 2018

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

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21 January 2018

Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

The landscape of nucleotide polymorphism among 13,500 genes of the conifer picea glauca, relationships with functions, and comparison with medicago truncatula.

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https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Parallel and lineage-specific molecular adaptation to climate in boreal black spruce

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21 January 2018

The genomic architecture and association genetics of adaptive characters using a candidate SNP approach in boreal black spruce.

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expression

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

The bud break process and its variation among local populations of boreal black spruce

1 reference

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21 January 2018

Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome

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21 January 2018

Highly informative single-copy nuclear microsatellite DNA markers developed using an AFLP-SSR approach in black spruce (Picea mariana) and red spruce (P. rubens).

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21 January 2018

Automated generation of heuristics for biological sequence comparison

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21 January 2018

An improved genotyping by sequencing (GBS) approach offering increased versatility and efficiency of SNP discovery and genotyping

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21 January 2018

Development and evaluation of SoySNP50K, a high-density genotyping array for soybean

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21 January 2018

Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size

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21 January 2018

Exome sequencing: the sweet spot before whole genomes

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Design and characterization of a 52K SNP chip for goats

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21 January 2018

A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array.

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21 January 2018

Quality assessment parameters for EST-derived SNPs from catfish

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https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12468

21 January 2018

Targeted re-sequencing of the allohexaploid wheat exome

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21 January 2018

Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture

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Identifiers

10.1111/1755-0998.12468

1 reference

Europe PubMed Central

8 September 2017

1 reference

Europe PubMed Central

8 September 2017

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