(Q39124834)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23861445%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer (English)

1 reference

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5 March 2020

author

Maximilian Christopeit

9

1 reference

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5 March 2020

13

Anirban Maitra

1 reference

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5 March 2020

author name string

Sanchari Bhattacharyya

1

1 reference

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5 March 2020

Yiting Yu

2

1 reference

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5 March 2020

Masako Suzuki

3

1 reference

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5 March 2020

Nathaniel Campbell

4

1 reference

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5 March 2020

Jozef Mazdo

5

1 reference

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5 March 2020

Aparna Vasanthakumar

6

1 reference

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5 March 2020

Tushar D Bhagat

7

1 reference

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5 March 2020

Sangeeta Nischal

8

1 reference

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5 March 2020

Samir Parekh

10

1 reference

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5 March 2020

Ulrich Steidl

11

1 reference

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5 March 2020

Lucy Godley

12

1 reference

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5 March 2020

John M Greally

14

1 reference

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5 March 2020

Amit Verma

15

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5 March 2020

language of work or name

English

0 references

publication date

16 July 2013

1 reference

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5 March 2020

published in

Nucleic Acids Research

1 reference

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5 March 2020

volume

41

1 reference

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5 March 2020

issue

16

1 reference

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5 March 2020

page(s)

e157

1 reference

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Creative Commons Attribution 3.0 Unported

5 March 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Global 5-hydroxymethylcytosine content is significantly reduced in tissue stem/progenitor cell compartments and in human cancers.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

TET family proteins and their role in stem cell differentiation and transformation.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Tet2 loss leads to increased hematopoietic stem cell self-renewal and myeloid transformation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Clinical effect of point mutations in myelodysplastic syndromes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Genome-wide analysis of promoter methylation associated with gene expression profile in pancreatic adenocarcinoma

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Tissue-specific distribution and dynamic changes of 5-hydroxymethylcytosine in mammalian genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Widespread hypomethylation occurs early and synergizes with gene amplification during esophageal carcinogenesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Leukemic IDH1 and IDH2 mutations result in a hypermethylation phenotype, disrupt TET2 function, and impair hematopoietic differentiation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Optimized design and data analysis of tag-based cytosine methylation assays

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Fast and SNP-tolerant detection of complex variants and splicing in short reads

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Genetic characterization of TET1, TET2, and TET3 alterations in myeloid malignancies

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Core signaling pathways in human pancreatic cancers revealed by global genomic analyses

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

Genomic profiling identifies GATA6 as a candidate oncogene amplified in pancreatobiliary cancer

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763560

9 September 2017

Identifiers

DOI

10.1093/NAR/GKT601

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23861445%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23861445%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23861445%20AND%20SRC:MED&resulttype=core&format=json