(Q39157646)

9 September 2017

Elucidating rice cell metabolism under flooding and drought stresses using flux-based modeling and analysis (English)

1 reference

9 September 2017

1 reference

Meiyappan Lakshmanan

1

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Dong-Yup Lee

object named as

Dong-Yup Lee

8

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author name string

Zhaoyang Zhang

2

1 reference

9 September 2017

Bijayalaxmi Mohanty

3

1 reference

9 September 2017

Jun-Young Kwon

4

1 reference

9 September 2017

Hong-Yeol Choi

5

1 reference

9 September 2017

Hyung-Jin Nam

6

1 reference

9 September 2017

Dong-Il Kim

7

1 reference

9 September 2017

language of work or name

English

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publication date

10 June 2013

1 reference

9 September 2017

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9 September 2017

162

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9 September 2017

4

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9 September 2017

2140-2150

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Flux-balance modeling of plant metabolism.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Quantifying ATP turnover in anoxic coleoptiles of rice (Oryza sativa) demonstrates preferential allocation of energy to protein synthesis

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Systems biology-based approaches toward understanding drought tolerance in food crops

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Frontiers in metabolic reconstruction and modeling of plant genomes

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Reconstruction of Arabidopsis metabolic network models accounting for subcellular compartmentalization and tissue-specificity

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Influence of abiotic stress signals on secondary metabolites in plants

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Metabolic network reconstruction and flux variability analysis of storage synthesis in developing oilseed rape (Brassica napus L.) embryos.

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

C4GEM, a genome-scale metabolic model to study C4 plant metabolism

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Not just a circle: flux modes in the plant TCA cycle

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

What is flux balance analysis?

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

The missing link in plant histidine biosynthesis: Arabidopsis myoinositol monophosphatase-like2 encodes a functional histidinol-phosphate phosphatase

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

A genome-scale metabolic model of Arabidopsis and some of its properties

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Drought stress and reactive oxygen species: Production, scavenging and signaling

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Flux balance analysis: interrogating genome-scale metabolic networks

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Rice germination and seedling growth in the absence of oxygen

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

The crucial role of plant mitochondria in orchestrating drought tolerance

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Flooding stress: acclimations and genetic diversity

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Effects of o(2) concentration on rice seedlings.

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Systems biotechnology for strain improvement

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Physiological and molecular basis of susceptibility and tolerance of rice plants to complete submergence

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Metabolic modelling of microbes: the flux-balance approach

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Regulation of gene expression in flux balance models of metabolism

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

KEGG: Kyoto Encyclopedia of Genes and Genomes

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Differential Molecular Responses of Rice and Wheat Coleoptiles to Anoxia Reveal Novel Metabolic Adaptations in Amino Acid Metabolism for Tissue Tolerance

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Is maximization of molar yield in metabolic networks favoured by evolution?

2 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3729788

Flux balance analysis of barley seeds: a computational approach to study systemic properties of central metabolism

2 December 2018

1 reference

12 December 2020

The Dual Function of Sugar Carriers: Transport and Sugar Sensing

1 reference

12 December 2020

Effect of Anoxia on Carbohydrate Metabolism in Rice Seedlings

1 reference

12 December 2020

Chloroplast Response to Low Leaf Water Potentials: III. Differing Inhibition of Electron Transport and Photophosphorylation

1 reference

12 December 2020

Fructose 2,6-bisphosphate and plant carbohydrate metabolism

1 reference

12 December 2020

An in silico compartmentalized metabolic model of Brassica napus enables the systemic study of regulatory aspects of plant central metabolism

1 reference

12 December 2020

The CO2/O 2 specificity of ribulose 1,5-bisphosphate carboxylase/oxygenase : Dependence on ribulosebisphosphate concentration, pH and temperature

1 reference

12 December 2020

On the Function of Mitochondrial Metabolism during Photosynthesis in Spinach (Spinacia oleracea L.) Leaves (Partitioning between Respiration and Export of Redox Equivalents and Precursors for Nitrate Assimilation Products)

1 reference

12 December 2020

Adsorptive loss of secreted recombinant proteins in transgenic rice cell suspension cultures

1 reference

12 December 2020

Regulation of alcoholic fermentation in coleoptiles of two rice cultivars differing in tolerance to anoxia

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.113.220178

1 reference

9 September 2017

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1 reference