(Q39177394)

9 September 2017

Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products. (English)

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9 September 2017

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6

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9 September 2017

7

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9 September 2017

Christopher W Beitel

1

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9 September 2017

Lutz Froenicke

2

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9 September 2017

Jenna M Lang

3

1 reference

9 September 2017

Ian F Korf

4

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9 September 2017

Richard W Michelmore

5

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9 September 2017

27 May 2014

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9 September 2017

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9 September 2017

2

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9 September 2017

e415

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Tackling soil diversity with the assembly of large, complex metagenomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

The future is now: single-cell genomics of bacteria and archaea

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Recent advances in nanopore sequencing

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Taxonomic binning of metagenome samples generated by next-generation sequencing technologies

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Grinder: a versatile amplicon and shotgun sequence simulator

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Repetitive DNA and next-generation sequencing: computational challenges and solutions

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Decontamination of MDA reagents for single cell whole genome amplification

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Microbial metagenomics: beyond the genome

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Metagenomic sequencing of an in vitro-simulated microbial community

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

An oestrogen-receptor-α-bound human chromatin interactome

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

What is microbial community ecology?

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Real-time DNA sequencing from single polymerase molecules

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Metagenomics: application of genomics to uncultured microorganisms

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Exploring prokaryotic diversity in the genomic era

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4045339

21 August 2018

Identifiers

DOI

10.7717/PEERJ.415

1 reference

9 September 2017

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9 September 2017

PubMed publication ID

24918035

1 reference