(Q39256728)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

title

Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

0 references

1 reference

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Arie B Brinkman

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Thomas Lengauer

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Christoph Bock

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

Hendrik Gerard Stunnenberg

15 February 2020

14

object named as

Hendrik G Stunnenberg

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

author name string

Femke Simmer

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Yassen Assenov

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Filomena Matarese

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Anita Kaan

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Lina Sabatino

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Alberto Villanueva

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Dori Huertas

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Vittorio Colantuoni

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Lucia Altucci

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

publication date

18 October 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

page(s)

1355-1367

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

15 February 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3528691

inferred from PubMed Central ID database lookup

cites work

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

A DNA hypermethylation module for the stem/progenitor cell signature of cancer.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Genome-wide analysis of the relationships between DNaseI HS, histone modifications and gene expression reveals distinct modes of chromatin domains

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Genome-scale analysis of aberrant DNA methylation in colorectal cancer

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

A DNA methylation fingerprint of 1628 human samples

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

A user's guide to the encyclopedia of DNA elements (ENCODE)

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Methyl-CpG binding column-based identification of nine genes hypermethylated in colorectal cancer

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Identification and validation of highly frequent CpG island hypermethylation in colorectal adenomas and carcinomas

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Regularization Paths for Generalized Linear Models via Coordinate Descent

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Model-based analysis of ChIP-Seq (MACS)

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Identification of novel functional TBP-binding sites and general factor repertoires

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Control of developmental regulators by Polycomb in human embryonic stem cells

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Epigenetic gene silencing in cancer – a mechanism for early oncogenic pathway addiction?

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Evidence for an instructive mechanism of de novo methylation in cancer cells.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

CpG island methylation in gastroenterologic neoplasia: a maturing field.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

DNA methylation in cancer: too much, but also too little

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Proper development of relay somatic sensory neurons and D2/D4 interneurons requires homeobox genes Rnx/Tlx-3 and Tlx-1

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

DNMT1 and DNMT3b cooperate to silence genes in human cancer cells

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

The Hox11 gene is essential for cell survival during spleen development

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

The 5-methylcytosine content of DNA from human tumors

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Hypomethylation distinguishes genes of some human cancers from their normal counterparts

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Deregulation of a Homeobox Gene, HOX11, by the t(10;14) in T Cell Leukemia

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Quantitative comparison of genome-wide DNA methylation mapping technologies.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Whole-genome DNA methylation profiling using MethylCap-seq.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Unique DNA methylome profiles in CpG island methylator phenotype colon cancers

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

Prognostic significance of altered expression of SDC2 and CYR61 in esophageal squamous cell carcinoma.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

The CpG island methylator phenotype correlates with long-range epigenetic silencing in colorectal cancer.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3528691

CpG island methylator phenotype in cancer

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23079744

12 December 2020

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/23079744

12 December 2020

inferred from PubMed ID database lookup

Expression and prognostic role of syndecan-2 in prostate cancer

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23079744

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.4161/EPI.22562

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

release_qibkick2xrak5l672jortpzn5q

15 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qibkick2xrak5l672jortpzn5q

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

PubMed publication ID

23079744

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079744%20AND%20SRC:MED&resulttype=core&format=json