(Q39575886)

13 September 2017

A highly multiplexed and sensitive RNA-seq protocol for simultaneous analysis of host and pathogen transcriptomes (English)

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13 September 2017

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1

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11 June 2020

6

Deborah T Hung

1 reference

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11 June 2020

author name string

Nathan Haseley

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27442864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Amy Fan

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27442864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Zohar Bloom-Ackermann

4

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11 June 2020

Jonathan Livny

5

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11 June 2020

publication date

21 July 2016

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13 September 2017

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27442864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

volume

11

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11 June 2020

issue

8

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11 June 2020

page(s)

1477-1491

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https://scigraph.springernature.com/pub.10.1038/nprot.2016.090

11 June 2020

exact match

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Dual RNA-seq of pathogen and host

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Dual RNA-seq of Nontypeable Haemophilus influenzae and Host Cell Transcriptomes Reveals Novel Insights into Host-Pathogen Cross Talk

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Simultaneous transcriptional profiling of bacteria and their host cells

31 March 2020

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The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host-pathogen interactions

31 March 2020

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Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses

31 March 2020

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Simultaneous generation of many RNA-seq libraries in a single reaction

31 March 2020

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Simultaneous transcriptional profiling of Leishmania major and its murine macrophage host cell reveals insights into host-pathogen interactions

31 March 2020

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Computational prediction of molecular pathogen-host interactions based on dual transcriptome data

31 March 2020

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An Interspecies Regulatory Network Inferred from Simultaneous RNA-seq of Candida albicans Invading Innate Immune Cells

31 March 2020

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Simultaneous RNA-seq analysis of a mixed transcriptome of rice and blast fungus interaction

31 March 2020

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Simultaneous transcriptome analysis of Sorghum and Bipolaris sorghicola by using RNA-seq in combination with de novo transcriptome assembly

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Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

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NF-kappaB translocation prevents host cell death after low-dose challenge by Legionella pneumophila.

31 March 2020

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A transcriptomic network identified in uninfected macrophages responding to inflammation controls intracellular pathogen survival.

31 March 2020

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Normalization of RNA-seq data using factor analysis of control genes or samples

31 March 2020

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Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

31 March 2020

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Fast and accurate short read alignment with Burrows-Wheeler transform

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31 March 2020

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31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NPROT.2016.090

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27442864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

1 reference