(Q39713722)

14 September 2017

title

COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge (English)

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14 September 2017

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3

Jed A Fuhrman

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14 September 2017

Yang Young Lu

1

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14 September 2017

Ting Chen

series ordinal

2

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14 September 2017

Fengzhu Sun

series ordinal

4

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14 September 2017

language of work or name

English

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publication date

2 June 2016

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14 September 2017

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14 September 2017

volume

33

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14 September 2017

issue

6

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14 September 2017

page(s)

791-798

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Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

14 September 2017

cites work

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Binning metagenomic contigs by coverage and composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Joint analysis of multiple metagenomic samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Graph Regularized Nonnegative Matrix Factorization for Data Representation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Reconstructing the genomic content of microbiome taxa through shotgun metagenomic deconvolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Structure, function and diversity of the healthy human microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

A Cluster Separation Measure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

MEGAN analysis of metagenomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

GroopM: an automated tool for the recovery of population genomes from related metagenomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Clustering metagenomic sequences with interpolated Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Learning the parts of objects by non-negative matrix factorization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

A New Unsupervised Binning Approach for Metagenomic Sequences Based on N-grams and Automatic Feature Weighting

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Understanding and enhancement of internal clustering validation measures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Classification of metagenomic sequences: methods and challenges

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Accurate phylogenetic classification of variable-length DNA fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

SPHINX--an algorithm for taxonomic binning of metagenomic sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

A human gut microbial gene catalogue established by metagenomic sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Metagenomics: genomic analysis of microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

NBC: the Naive Bayes Classification tool webserver for taxonomic classification of metagenomic reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

The impact of normalization and phylogenetic information on estimating the distance for metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Fast protein classification with multiple networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Alignment-free sequence comparison (II): theoretical power of comparison statistics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

Kraken: ultrafast metagenomic sequence classification using exact alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

A novel abundance-based algorithm for binning metagenomic sequences using l-tuples.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

An ORFome assembly approach to metagenomics sequences analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW290

10.1093/BIOINFORMATICS/BTW290

21 January 2018

Identifiers

DOI

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journals/bioinformatics/LuCFS17

14 September 2017

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DBLP Dataset 2021-01-02

28 January 2021

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