(Q39715480)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21858778%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

Predicting the open conformations of protein kinases using molecular dynamics simulations (English)

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2

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author name string

Una Bjarnadottir

series ordinal

1

1 reference

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publication date

19 August 2011

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11 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21858778%20AND%20SRC:MED&resulttype=core&format=json

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volume

97

1 reference

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issue

1

1 reference

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page(s)

65-72

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describes a project that uses

11 February 2020

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

cites work

AMP-activated protein kinase (AMPK) control of fatty acid and glucose metabolism in the ischemic heart

1 reference

The bifunctional role of hexokinase in metabolism and glucose signaling.

21 January 2018

1 reference

Roles of 5'-AMP-activated protein kinase (AMPK) in mammalian glucose homoeostasis

21 January 2018

1 reference

Cytoskeleton and cell cycle control during meiotic maturation of the mouse oocyte: integrating time and space.

21 January 2018

1 reference

Protein kinase A acts at multiple points to inhibit Xenopus oocyte maturation

21 January 2018

1 reference

Protein phosphorylation in apoptosis.

21 January 2018

1 reference

Regulation of transcription elongation by phosphorylation

21 January 2018

1 reference

Regulation of transcription by cyclic AMP-dependent protein kinase

21 January 2018

1 reference

Small molecule glucokinase activators as novel anti-diabetic agents.

21 January 2018

1 reference

Ikappa-B kinase-2 inhibitor blocks inflammation in human airway smooth muscle and a rat model of asthma

21 January 2018

1 reference

Dynamics of signaling by PKA.

21 January 2018

1 reference

Dynamics of cAMP-dependent protein kinase

21 January 2018

1 reference

PKA: a portrait of protein kinase dynamics

21 January 2018

1 reference

Crystal structures of the myristylated catalytic subunit of cAMP-dependent protein kinase reveal open and closed conformations

21 January 2018

1 reference

Calculating pKa values in the cAMP-dependent protein kinase: the effect of conformational change and ligand binding

21 January 2018

1 reference

Derivation of rules for comparative protein modeling from a database of protein structure alignments

21 January 2018

1 reference

A natural coarse graining for simulating large biomolecular motion

21 January 2018

1 reference

Identification of two distinct inactive conformations of the beta2-adrenergic receptor reconciles structural and biochemical observations

21 January 2018

1 reference

WHAT IF: a molecular modeling and drug design program

21 January 2018

1 reference

PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations

21 January 2018

1 reference

GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/BIP.21704

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21858778%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference