(Q39788484)

14 September 2017

MeCorS: Metagenome-enabled error correction of single cell sequencing reads (English)

1 reference

14 September 2017

3

Tanja Woyke

0 references

Alexander Sczyrba

series ordinal

4

object named as

Alexander Sczyrba

0 references

Andreas Bremges

series ordinal

1

object named as

Andreas Bremges

1 reference

14 September 2017

Esther Singer

2

1 reference

PMC publication ID

4937190

14 September 2017

language of work or name

English

0 references

publication date

15 March 2016

1 reference

14 September 2017

3

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

14 September 2017

32

1 reference

14 September 2017

14

1 reference

14 September 2017

2199-2201

1 reference

Creative Commons Attribution 4.0 International

14 September 2017

start time

28 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Unusual biology across a group comprising more than 15% of domain Bacteria.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Denoising DNA deep sequencing data-high-throughput sequencing errors and their correction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Reconstructing each cell's genome within complex microbial communities-dream or reality?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Insights into the phylogeny and coding potential of microbial dark matter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

QUAST: quality assessment tool for genome assemblies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Error correction of high-throughput sequencing datasets with non-uniform coverage

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Whole genome amplification and de novo assembly of single bacterial cells

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Single-cell genomic sequencing using Multiple Displacement Amplification

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

An Eulerian path approach to DNA fragment assembly

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

BFC: correcting Illumina sequencing errors

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

Exploring single-sample SNP and INDEL calling with whole-genome de novo assembly

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4937190

10.1093/BIOINFORMATICS/BTW144

15 June 2018

Identifiers

DOI

1 reference

journals/bioinformatics/BremgesSWS16

14 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

4937190

14 September 2017

PubMed publication ID

27153586

1 reference

PMC publication ID

4937190