(Q40038877)

16 September 2017

title

Intrahost Selection Pressures Drive Rapid Dengue Virus Microevolution in Acute Human Infections (English)

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16 September 2017

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6

Angel Balmaseda

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16 September 2017

7

Eva Harris

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16 September 2017

Poornima Parameswaran

series ordinal

1

object named as

Poornima Parameswaran

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16 September 2017

5

Magelda Montoya

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16 September 2017

4

Meghana Eswarappa

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16 September 2017

Chunling Wang

2

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16 September 2017

Surbhi Bharat Trivedi

series ordinal

3

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16 September 2017

publication date

1 September 2017

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16 September 2017

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16 September 2017

volume

22

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16 September 2017

issue

3

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16 September 2017

page(s)

400-410.e5

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Analysis of intrapatient heterogeneity uncovers the microevolution of Middle East respiratory syndrome coronavirus.

16 September 2017

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30 August 2018

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30 August 2018

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30 August 2018

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Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission

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Intrahost dynamics of antiviral resistance in influenza A virus reflect complex patterns of segment linkage, reassortment, and natural selection

30 August 2018

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Overlapping local and long-range RNA-RNA interactions modulate dengue virus genome cyclization and replication

30 August 2018

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30 August 2018

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Dengue viruses are enhanced by distinct populations of serotype cross-reactive antibodies in human immune sera

30 August 2018

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Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak

30 August 2018

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Increased replicative fitness of a dengue virus 2 clade in native mosquitoes: potential contribution to a clade replacement event in Nicaragua

30 August 2018

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A toggle switch controls the low pH-triggered rearrangement and maturation of the dengue virus envelope proteins

30 August 2018

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Pathologic highlights of dengue hemorrhagic fever in 13 autopsy cases from Myanmar

30 August 2018

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Within-host evolution results in antigenically distinct GII.4 noroviruses

30 August 2018

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Acute emergence and reversion of influenza A virus quasispecies within CD8+ T cell antigenic peptides

30 August 2018

1 reference

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Analysis of cross-reactive antibodies recognizing the fusion loop of envelope protein and correlation with neutralizing antibody titers in Nicaraguan dengue cases

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Evaluation of the diagnostic utility of the traditional and revised WHO dengue case definitions

30 August 2018

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Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells

30 August 2018

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The global distribution and burden of dengue

30 August 2018

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Differential targeting of viral components by CD4+ versus CD8+ T lymphocytes in dengue virus infection.

30 August 2018

1 reference

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Genome-wide patterns of intrahuman dengue virus diversity reveal associations with viral phylogenetic clade and interhost diversity

30 August 2018

1 reference

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Development and characterization of a reverse genetic system for studying dengue virus serotype 3 strain variation and neutralization

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Fast gapped-read alignment with Bowtie 2

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Contribution of intra- and interhost dynamics to norovirus evolution

30 August 2018

1 reference

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Dynamics of dengue disease severity determined by the interplay between viral genetics and serotype-specific immunity

30 August 2018

1 reference

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High-resolution analysis of intrahost genetic diversity in dengue virus serotype 1 infection identifies mixed infections

30 August 2018

1 reference

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Evaluation of the traditional and revised WHO classifications of Dengue disease severity

30 August 2018

1 reference

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30 August 2018

1 reference

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The 5' and 3' downstream AUG region elements are required for mosquito-borne flavivirus RNA replication

30 August 2018

1 reference

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The human immune response to Dengue virus is dominated by highly cross-reactive antibodies endowed with neutralizing and enhancing activity

30 August 2018

1 reference

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Cross-reacting antibodies enhance dengue virus infection in humans

30 August 2018

1 reference

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Protonation of Individual Histidine Residues Is Not Required for the pH-Dependent Entry of West Nile Virus: Evaluation of the "Histidine Switch" Hypothesis

30 August 2018

1 reference

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Antibodies determine virulence in dengue

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Dengue 1 Diversity and Microevolution, French Polynesia 2001–2006: Connection with Epidemiology and Clinics

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

The Sequence Alignment/Map format and SAMtools

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Tropism of dengue virus in mice and humans defined by viral nonstructural protein 3-specific immunostaining.

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Dynamic correlation between intrahost HIV-1 quasispecies evolution and disease progression

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Protective and Enhancing HLA Alleles, HLA-DRB1*0901 and HLA-A*24, for Severe Forms of Dengue Virus Infection, Dengue Hemorrhagic Fever and Dengue Shock Syndrome

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Correlation between pre-treatment quasispecies complexity and treatment outcome in chronic HCV genotype 3a

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Relative quantitation of virus population size in mixed genotype infections using sequencing chromatograms

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Hepatitis C virus dynamics during natural infection are associated with long-term histological outcome of chronic hepatitis C disease

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Differences in dengue severity in infants, children, and adults in a 3-year hospital-based study in Nicaragua.

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Serotype-specific detection of dengue viruses in a fourplex real-time reverse transcriptase PCR assay

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Low human immunodeficiency virus envelope diversity correlates with low in vitro replication capacity and predicts spontaneous control of plasma viremia after treatment interruptions

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Early T-cell responses to dengue virus epitopes in Vietnamese adults with secondary dengue virus infections

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Epitope determinants of a chimpanzee Fab antibody that efficiently cross-neutralizes dengue type 1 and type 2 viruses map to inside and in close proximity to fusion loop of the dengue type 2 virus envelope glycoprotein

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Study of sequence variation of dengue type 3 virus in naturally infected mosquitoes and human hosts: implications for transmission and evolution

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Localization of dengue virus in naturally infected human tissues, by immunohistochemistry and in situ hybridization

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

RECENT EPIDEMICS OF HEMORRHAGIC FEVER IN THAILAND. OBSERVATIONS RELATED TO PATHOGENESIS OF A "NEW" DENGUE DISEASE

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Emergence and global spread of a dengue serotype 3, subtype III virus

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

DC-SIGN (CD209) mediates dengue virus infection of human dendritic cells

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Sequence diversity of the capsid gene and the nonstructural gene NS2B of dengue-3 virus in vivo

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Dengue Type 3 Virus in Plasma Is a Population of Closely Related Genomes: Quasispecies

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Early changes in hepatitis C viral quasispecies during interferon therapy predict the therapeutic outcome

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Interferon inhibits dengue virus infection by preventing translation of viral RNA through a PKR-independent mechanism

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Immunopathogenesis of Dengue hemorrhagic fever

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

RNA virus mutations and fitness for survival

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Origins of dengue type 2 viruses associated with increased pathogenicity in the Americas

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Dengue Virus-Specific and Flavivirus Group Determinants Identified with Monoclonal Antibodies by Indirect Immunofluorescence

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

Antibody-mediated enhancement of Flavivirus replication in macrophage-like cell lines

30 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5616187

10.1016/J.CHOM.2017.08.003

30 August 2018

Identifiers

DOI

1 reference

16 September 2017

0 references

1 reference