(Q40059533)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

title

Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

0 references

1 reference

dimensionality reduction

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Davide Risso

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Sandrine Dudoit

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

author name string

Kelly Street

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Elizabeth Purdom

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

publication date

21 July 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

page(s)

1158

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

28 March 2020

copyright license

start time

21 July 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

Orchestrating high-throughput genomic analysis with Bioconductor

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

Tight clustering: a resampling-based approach for identifying stable and tight patterns in data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

Deconstructing Olfactory Stem Cell Trajectories at Single-Cell Resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5558107

ZINB-WaVE: A general and flexible method for signal extraction from single-cell RNA-seq data

17 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.12688%2FF1000RESEARCH.12122.1

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics.

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28868140

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A general and flexible method for signal extraction from single-cell RNA-seq data.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28868140

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.12688/F1000RESEARCH.12122.1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

release_lu2wfzzk4bddpnouwwfudht66m

28 March 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/lu2wfzzk4bddpnouwwfudht66m

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28868140%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

PubMed publication ID

28868140

1 reference