(Q40085567)

17 September 2017

GeneValidator: identify problems with protein-coding gene predictions (English)

1 reference

17 September 2017

5

1 reference

17 September 2017

Ismail Moghul

2

0 references

Claudio Bustos

object named as

Claudio Bustos

series ordinal

4

0 references

author name string

Monica-Andreea Drăgan

series ordinal

1

1 reference

PMCID

4866521

17 September 2017

Anurag Priyam

series ordinal

3

1 reference

PMCID

4866521

17 September 2017

language of work or name

English

0 references

publication date

18 January 2016

1 reference

17 September 2017

1 reference

17 September 2017

32

1 reference

17 September 2017

10

1 reference

17 September 2017

1559-1561

1 reference

Creative Commons Attribution 4.0 International

17 September 2017

start time

12 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A cost-effective RNA sequencing protocol for large-scale gene expression studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

UniProt: a hub for protein information

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Integration of mapped RNA-Seq reads into automatic training of eukaryotic gene finding algorithm

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Evaluating high-throughput ab initio gene finders to discover proteins encoded in eukaryotic pathogen genomes missed by laboratory techniques

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

A beginner's guide to eukaryotic genome annotation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Visualizing genomes: techniques and challenges

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

BLAST+: architecture and applications

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Quantitative measures for the management and comparison of annotated genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

big data: The future of biocuration

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Gene finding in novel genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

ASPic-GeneID: a lightweight pipeline for gene prediction and alternative isoforms detection

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Visualization and quality assessment of de novo genome assemblies

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

A novel hybrid gene prediction method employing protein multiple sequence alignments.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4866521

20 August 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/26787666

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTW015

1 reference

journals/bioinformatics/DraganMPBW16

17 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

17 September 2017

1 reference

PMCID

4866521