(Q40374032)

19 September 2017

A knowledge-driven approach for crystallographic protein model completion (English)

1 reference

19 September 2017

6

1 reference

19 September 2017

Victor S Lamzin

5

0 references

author name string

Krista Joosten

1

1 reference

19 September 2017

Serge X Cohen

2

1 reference

19 September 2017

Paul Emsley

3

1 reference

19 September 2017

Wijnand Mooij

4

1 reference

19 September 2017

19 March 2008

1 reference

Acta Crystallographica Section D: Biological Crystallography

19 September 2017

1 reference

19 September 2017

64

1 reference

19 September 2017

Pt 4

1 reference

19 September 2017

416-424

1 reference

Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models

19 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

The Buccaneer software for automated model building. 1. Tracing protein chains

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Conformer generation under restraints

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

LAFIRE: software for automating the refinement process of protein-structure analysis.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Real-space protein-model completion: an inverse-kinematics approach.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Towards complete validated models in the next generation of ARP/wARP

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Coot: model-building tools for molecular graphics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Polyalanine reconstruction from Calpha positions using the program CALPHA can aid initial phasing of data by molecular replacement procedures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Stereochemistry of polypeptide chain configurations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Automated side-chain model building and sequence assignment by template matching

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Automated main-chain model building by template matching and iterative fragment extension

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

ARP/wARP's model-building algorithms. I. The main chain

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

A new software routine that automates the fitting of protein X-ray crystallographic electron-density maps.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Automated protein model building combined with iterative structure refinement

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Improved methods for building protein models in electron density maps and the location of errors in these models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Validation of protein models from Cα coordinates alone

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2467521

Is one solution good enough?

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18391408

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1107/S0907444908001558

1 reference

19 September 2017

1 reference

19 September 2017

1 reference