(Q40408785)

20 September 2017

Drosophila X-Linked Genes Have Lower Translation Rates than Autosomal Genes (English)

1 reference

20 September 2017

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1

1 reference

20 September 2017

Daven C Presgraves

2

1 reference

20 September 2017

20 October 2015

1 reference

Molecular Biology and Evolution

20 September 2017

1 reference

20 September 2017

33

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20 September 2017

2

1 reference

20 September 2017

413-428

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Multifactorial determinants of protein expression in prokaryotic open reading frames

20 September 2017

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

NCBI GEO: archive for functional genomics data sets--update

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Efficient translation initiation dictates codon usage at gene start

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Codon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

GtRNAdb: a database of transfer RNA genes detected in genomic sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Positively charged residues are the major determinants of ribosomal velocity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

No X-chromosome dosage compensation in human proteomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Comparative validation of the D. melanogaster modENCODE transcriptome annotation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Drosophila dosage compensation involves enhanced Pol II recruitment to male X-linked promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

WebLogo: A Sequence Logo Generator

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Solving the riddle of codon usage preferences: a test for translational selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Reduced synonymous substitution rate at the start of enterobacterial genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Increased expression of X-linked genes in mammals is associated with a higher stability of transcripts and an increased ribosome density

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Transcriptional control of a whole chromosome: emerging models for dosage compensation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

"Jump start and gain" model for dosage compensation in Drosophila based on direct sequencing of nascent transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Molecular phylogeny of the Drosophila obscura species group, with emphasis on the Old World species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Causes and effects of N-terminal codon bias in bacterial genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Global analysis of X-chromosome dosage compensation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

A protein complex network of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Codon bias and heterologous protein expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

A role for mRNA secondary structure in the control of translation initiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Patterns of synonymous codon usage in Drosophila melanogaster genes with sex-biased expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Sequence and structure determinants of Drosophila Hsp70 mRNA translation: 5'UTR secondary structure specifically inhibits heat shock protein mRNA translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Widespread changes in the posttranscriptional landscape at the Drosophila oocyte-to-embryo transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Coding-sequence determinants of gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

A network of multiple regulatory layers shapes gene expression in fission yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Sex chromosome dosage compensation: definitely not for everyone.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

UNAFold: software for nucleic acid folding and hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Sex chromosome-specific regulation in the Drosophila male germline but little evidence for chromosomal dosage compensation or meiotic inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

The positive relationship between codon usage bias and translation initiation AUG context in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Synonymous but not the same: the causes and consequences of codon bias

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Codon optimality is a major determinant of mRNA stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Balanced codon usage optimizes eukaryotic translational efficiency

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

The ribosome uses two active mechanisms to unwind messenger RNA during translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

PEST sequences and regulation by proteolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

EMBOSS: the European Molecular Biology Open Software Suite

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Amino acid sequences common to rapidly degraded proteins: the PEST hypothesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Rate-limiting steps in yeast protein translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

X-linked genes evolve higher codon bias in Drosophila and Caenorhabditis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Contrasting the efficacy of selection on the X and autosomes in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

FlyBase 102--advanced approaches to interrogating FlyBase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Integrated genomic and proteomic analyses of gene expression in Mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Composite effects of gene determinants on the translation speed and density of ribosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Translation efficiency is determined by both codon bias and folding energy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Quantitative Mass Spectrometry Reveals Partial Translational Regulation for Dosage Compensation in Chicken

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

X-to-autosome expression and msl-2 transcript abundance correlate among Drosophila melanogaster somatic tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Codon usage in twelve species of Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Reversal of an ancient sex chromosome to an autosome in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

The 'effective number of codons' used in a gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Codon-by-codon modulation of translational speed and accuracy via mRNA folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

A simple multiallele model and its application to identifying preferred-unpreferred codons using polymorphism data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Expression in aneuploid Drosophila S2 cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Nonsense-mediated decay targets have multiple sequence-related features that can inhibit translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

Translational selection and molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV227

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSV227

1 reference

release_kvgdumg2nrdq5dts5cih2rixxu

20 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/kvgdumg2nrdq5dts5cih2rixxu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PubMed ID

26486873

1 reference

PubMed ID

26486873