(Q40543545)

21 September 2017

Workflow for generating competing hypothesis from models with parameter uncertainty (English)

1 reference

21 September 2017

1 reference

1

1 reference

21 September 2017

Albert Compte

2

0 references

Jesper Tegnér

series ordinal

3

object named as

Jesper Tegner

1 reference

PMC publication ID

3262450

21 September 2017

language of work or name

1 reference

30 March 2011

1 reference

21 September 2017

1 reference

21 September 2017

1

1 reference

21 September 2017

3

1 reference

21 September 2017

438-449

1 reference

Differential and integral views of genetics in computational systems biology

21 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

When the Optimal Is Not the Best: Parameter Estimation in Complex Biological Models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Parameter identification, experimental design and model falsification for biological network models using semidefinite programming

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Systems analysis of cellular networks under uncertainty

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Computational disease modeling - fact or fiction?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Systems biology: model based evaluation and comparison of potential explanations for given biological data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Model-based hypothesis testing of key mechanisms in initial phase of insulin signaling

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Why are computational neuroscience and systems biology so separate?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Regulatory T-cell immunity and its relevance to atherosclerosis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Transcriptional profiling uncovers a network of cholesterol-responsive atherosclerosis target genes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Universally sloppy parameter sensitivities in systems biology models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Ensemble modeling for analysis of cell signaling dynamics.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Data-based identifiability analysis of non-linear dynamical models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Efficient classification of complete parameter regions based on semidefinite programming

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Dynamical characteristics common to neuronal competition models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Complex parameter landscape for a complex neuron model

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Parameter estimation in biochemical pathways: a comparison of global optimization methods

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Statistical mechanical approaches to models with many poorly known parameters

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

An ensemble method for identifying regulatory circuits with special reference to the qa gene cluster of Neurospora crassa.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Mass and information feedbacks through receptor endocytosis govern insulin signaling as revealed using a parameter-free modeling framework.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Reconciling coherent oscillation with modulation of irregular spiking activity in selective attention: gamma-range synchronization between sensory and executive cortical areas

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Simplification of Mathematical Models of Chemical Reaction Systems.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

A cluster separation measure.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Why are nonlinear fits to data so challenging?

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

A method for robust model order reduction in pharmacokinetics.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Simplified yet highly accurate enzyme kinetics for cases of low substrate concentrations

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Deconstructing the core dynamics from a complex time-lagged regulatory biological circuit

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Mapping global sensitivity of cellular network dynamics: sensitivity heat maps and a global summation law.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Estimating parameters for generalized mass action models using constraint propagation.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

Synaptic mechanisms and network dynamics underlying spatial working memory in a cortical network model.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3262450

A Cluster Separation Measure

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSFS.2011.0015

Least squares quantization in PCM

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSFS.2011.0015

Silhouettes: A graphical aid to the interpretation and validation of cluster analysis

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSFS.2011.0015

Pathogenesis of atherosclerosis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22670212

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Pathogenesis of atherosclerosis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22670212

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22670212

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSFS.2011.0015

1 reference

21 September 2017

1 reference

PMC publication ID

3262450

21 September 2017

PubMed publication ID

22670212

1 reference

PMC publication ID

3262450