(Q40854198)

24 September 2017

ProDeGe: a computational protocol for fully automated decontamination of genomes (English)

1 reference

24 September 2017

8

1 reference

24 September 2017

10

1 reference

24 September 2017

9

Tanja Woyke

1 reference

24 September 2017

Scott Clingenpeel

3

0 references

Amrita Pati

series ordinal

11

object named as

Amrita Pati

1 reference

24 September 2017

2

Evan Andersen

1 reference

24 September 2017

1

Kristin Tennessen

1 reference

24 September 2017

4

Christian Rinke

1 reference

24 September 2017

Derek S Lundberg

5

1 reference

PMCID

4681846

24 September 2017

James Han

series ordinal

6

1 reference

PMCID

4681846

24 September 2017

Jeff L Dangl

series ordinal

7

1 reference

24 September 2017

9 June 2015

1 reference

24 September 2017

1 reference

24 September 2017

10

1 reference

24 September 2017

1

1 reference

24 September 2017

269-272

1 reference

Creative Commons Attribution 4.0 International

24 September 2017

start time

9 June 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/ismej.2015.100

0 references

cites work

Large-scale contamination of microbial isolate genomes by Illumina PhiX control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Hidden diversity in honey bee gut symbionts detected by single-cell genomics

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

IMG 4 version of the integrated microbial genomes comparative analysis system

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Insights into the phylogeny and coding potential of microbial dark matter

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Decontamination of MDA reagents for single cell whole genome amplification

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Fast identification and removal of sequence contamination from genomic and metagenomic datasets

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

SmashCell: a software framework for the analysis of single-cell amplified genome sequences

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Prodigal: prokaryotic gene recognition and translation initiation site identification

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

BLAST+: architecture and applications

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

Microbiology. Genomes from metagenomics.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4681846

High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India

19 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FISMEJ.2015.100

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/26057843

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2015.100

1 reference

24 September 2017

1 reference

24 September 2017

1 reference

PMCID

4681846