(Q41550691)

English

Introductory lecture: interpreting and predicting Hofmeister salt ion and solute effects on biopolymer and model processes using the solute partitioning model

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scholarly article

1 reference

Europe PubMed Central

3 October 2017

Introductory lecture: interpreting and predicting Hofmeister salt ion and solute effects on biopolymer and model processes using the solute partitioning model (English)

1 reference

Europe PubMed Central

3 October 2017

1 reference

based on heuristic

inferred from title

author name string

M Thomas Record

1

1 reference

Europe PubMed Central

3 October 2017

Emily Guinn

2

1 reference

Europe PubMed Central

3 October 2017

Laurel Pegram

3

1 reference

Europe PubMed Central

3 October 2017

Michael Capp

4

1 reference

Europe PubMed Central

3 October 2017

publication date

1 January 2013

1 reference

Europe PubMed Central

3 October 2017

Faraday Discussions

1 reference

Europe PubMed Central

3 October 2017

160

1 reference

Europe PubMed Central

3 October 2017

9-44; discussion 103-20

1 reference

Europe PubMed Central

3 October 2017

Coulombic free energy and salt ion association per phosphate of all-atom models of DNA oligomer: dependence on oligomer size

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Quantifying accumulation or exclusion of H(+), HO(-), and Hofmeister salt ions near interfaces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Toward a molecular understanding of protein solubility: increased negative surface charge correlates with increased solubility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Molecular mechanisms of ion-specific effects on proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Separation of preferential interaction and excluded volume effects on DNA duplex and hairpin stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Osmolyte effects on protein stability and solubility: a balancing act between backbone and side-chains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Backbone and side-chain contributions in protein denaturation by urea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Why Hofmeister effects of many salts favor protein folding but not DNA helix formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Preferential interactions between small solutes and the protein backbone: a computational analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Interactions of the osmolyte glycine betaine with molecular surfaces in water: thermodynamics, structural interpretation, and prediction of m-values.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

The inverse and direct Hofmeister series for lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Using surface tension data to predict differences in surface and bulk concentrations of nonelectrolytes in water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

ProtSA: a web application for calculating sequence specific protein solvent accessibilities in the unfolded ensemble.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Urea, but not guanidinium, destabilizes proteins by forming hydrogen bonds to the peptide group.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Thermodynamic origin of hofmeister ion effects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Recent applications of Kirkwood-Buff theory to biological systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Anatomy of energetic changes accompanying urea-induced protein denaturation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Urea-amide preferential interactions in water: quantitative comparison of model compound data with biopolymer results using water accessible surface areas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Effects of osmolytes on RNA secondary and tertiary structure stabilities and RNA-Mg2+ interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Partitioning of atmospherically relevant ions between bulk water and the water/vapor interface

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Use of urea and glycine betaine to quantify coupled folding and probe the burial of DNA phosphates in lac repressor-lac operator binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Predicting the energetics of osmolyte-induced protein folding/unfolding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Protein stability in mixed solvents: a balance of contact interaction and excluded volume

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Thermal and urea-induced unfolding of the marginally stable lac repressor DNA-binding domain: a model system for analysis of solute effects on protein processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Thermodynamics of interactions of urea and guanidinium salts with protein surface: relationship between solute effects on protein processes and changes in water-accessible surface area

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Strong DNA binding by covalently linked dimeric Lac headpiece: evidence for the crucial role of the hinge helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Use of organic cosmotropic solutes to crystallize flexible proteins: application to T7 RNA polymerase and its complex with the inhibitor T7 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

How Hofmeister ion interactions affect protein stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Betaine can eliminate the base pair composition dependence of DNA melting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Urea unfolding of peptide helices as a model for interpreting protein unfolding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Interpretation of preferential interaction coefficients of nonelectrolytes and of electrolyte ions in terms of a two-domain model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

The stabilization of proteins by osmolytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Steric exclusion is the principal source of the preferential hydration of proteins in the presence of polyethylene glycols

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Salt effect on hydrophobic interactions in precipitation and chromatography of proteins: an interpretation of the lyotropic series

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

6 June 2018

Investigating the hydrogen-bonding model of urea denaturation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Gibbs-Duhem-based relationships among derivatives expressing the concentration dependences of selected chemical potentials for a multicomponent system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Preferential interactions of glycine betaine and of urea with DNA: implications for DNA hydration and for effects of these solutes on DNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

The exclusion of glycine betaine from anionic biopolymer surface: why glycine betaine is an effective osmoprotectant but also a compatible solute

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Application of the local-bulk partitioning and competitive binding models to interpret preferential interactions of glycine betaine and urea with protein surface

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Roles of cytoplasmic osmolytes, water, and crowding in the response of Escherichia coli to osmotic stress: biophysical basis of osmoprotection by glycine betaine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Control of protein stability and reactions by weakly interacting cosolvents: the simplicity of the complicated.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Analysis of effects of salts and uncharged solutes on protein and nucleic acid equilibria and processes: a practical guide to recognizing and interpreting polyelectrolyte effects, Hofmeister effects, and osmotic effects of salts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

The thermodynamics of solvent exchange.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Extension of the theory of linked functions to incorporate the effects of protein hydration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694758

19 August 2018

Negligible effect of ions on the hydrogen-bond structure in liquid water

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hofmeister salt effects on surface tension arise from partitioning of anions and cations between bulk water and the air-water interface

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Can simulations quantitatively predict peptide transfer free energies to urea solutions? Thermodynamic concepts and force field limitations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamic characterization of interactions of native bovine serum albumin with highly excluded (glycine betaine) and moderately accumulated (urea) solutes by a novel application of vapor pressure osmometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential binding of solvent components to proteins in mixed water-organic solvent systems

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: interpretation in terms of coupled processes of formation and association of single-stranded helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermal stability of proteins in the presence of poly(ethylene glycols)

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The relationship of structure to the effectiveness of denaturing agents for deoxyribonucleic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thickness of the hydration layer of a protein from molecular dynamics simulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model studies on the effects of neutral salts on the conformational stability of biological macromolecules. II. Effects of vicinal hydrophobic groups on the specificity of binding of ions to amide groups

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

THE SOLUBILITY OF AMINO ACIDS AND RELATED COMPOUNDS IN AQUEOUS UREA SOLUTIONS

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamic analysis of interactions between denaturants and protein surface exposed on unfolding: interpretation of urea and guanidinium chloride m-values and their correlation with changes in accessible surface area (ASA) using preferential inte

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Air−Liquid Interfaces of Aqueous Solutions Containing Ammonium and Sulfate: Spectroscopic and Molecular Dynamics Studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unified Molecular Picture of the Surfaces of Aqueous Acid, Base, and Salt Solutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of salts on the free energy of the peptide group

1 reference

https://pubmed.ncbi.nlm.nih.gov/23795491

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1039/C2FD20128C

1 reference

Europe PubMed Central

3 October 2017

1 reference

Europe PubMed Central

3 October 2017

1 reference

Europe PubMed Central

3 October 2017

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