(Q41737733)

English

Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors

scientific article published on September 2014

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors (English)

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

1 reference

based on heuristic

inferred from title

3

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Donald M. Gardiner

4

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Jana Sperschneider

object named as

Jana Sperschneider

1

0 references

Narayana M Upadhyaya

object named as

Narayana M Upadhyaya

5

0 references

object named as

Karam B Singh

6

0 references

author name string

Hua Ying

2

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

John M Manners

7

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Jennifer M Taylor

8

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

publication date

1 September 2014

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Frontiers in Plant Science

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

5

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

372

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector genes

1 reference

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The genome sequence and effector complement of the flax rust pathogen Melampsora lini

1 reference

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6 June 2018

A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi

1 reference

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6 June 2018

Filamentous plant pathogen effectors in action

1 reference

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6 June 2018

Genome sequences of six wheat-infecting fusarium species isolates

1 reference

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Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing

1 reference

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6 June 2018

Coevolution and life cycle specialization of plant cell wall degrading enzymes in a hemibiotrophic pathogen

1 reference

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6 June 2018

Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts

1 reference

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6 June 2018

Genome evolution in filamentous plant pathogens: why bigger can be better

1 reference

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6 June 2018

The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1.

1 reference

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6 June 2018

Using hierarchical clustering of secreted protein families to classify and rank candidate effectors of rust fungi

1 reference

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6 June 2018

The genome portal of the Department of Energy Joint Genome Institute

1 reference

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6 June 2018

SignalP 4.0: discriminating signal peptides from transmembrane regions

1 reference

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6 June 2018

The role of effectors of biotrophic and hemibiotrophic fungi in infection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Plants versus pathogens: an evolutionary arms race

1 reference

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6 June 2018

HMMER web server: interactive sequence similarity searching

1 reference

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6 June 2018

The Emergence of Ug99 Races of the Stem Rust Fungus is a Threat to World Wheat Production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Plant immunity: towards an integrated view of plant-pathogen interactions

1 reference

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6 June 2018

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

1 reference

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6 June 2018

ETE: a python Environment for Tree Exploration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Diversity and evolution of effector loci in natural populations of the plant pathogen Melampsora lini.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Recent progress in discovery and functional analysis of effector proteins of fungal and oomycete plant pathogens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

MEME SUITE: tools for motif discovery and searching

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Rapidly evolving genes in pathogens: methods for detecting positive selection and examples among fungi, bacteria, viruses and protists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Evolution of prokaryotic and eukaryotic virulence effectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

PyCogent: a toolkit for making sense from sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

WoLF PSORT: protein localization predictor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

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Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

1 reference

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6 June 2018

Direct protein interaction underlies gene-for-gene specificity and coevolution of the flax resistance genes and flax rust avirulence genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Haustorially expressed secreted proteins from flax rust are highly enriched for avirulence elicitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

An algorithm for progressive multiple alignment of sequences with insertions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

6 June 2018

Bayes empirical bayes inference of amino acid sites under positive selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

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Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

1 reference

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An efficient algorithm for large-scale detection of protein families

1 reference

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EMBOSS: the European Molecular Biology Open Software Suite

1 reference

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1 reference

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6 June 2018

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1 reference

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Effector specialization in a lineage of the Irish potato famine pathogen.

1 reference

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Agriculture. Right-sizing stem-rust research.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

18 August 2018

Stem rust of small grains and grasses caused by Puccinia graminis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

18 August 2018

Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

18 August 2018

The Melampsora lini AvrL567 avirulence genes are expressed in haustoria and their products are recognized inside plant cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4150398

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Patterns of Diversifying Selection in the Phytotoxin-like scr74 Gene Family of Phytophthora infestans

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00372

21 January 2018

The effect of insertions, deletions, and alignment errors on the branch-site test of positive selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/25225496

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Bacterial Type III Secretion Assay for Delivery of Fungal Effector Proteins into Wheat

1 reference

https://pubmed.ncbi.nlm.nih.gov/25225496

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Geographical variation and positive diversifying selection in the host-specific toxin SnToxA

1 reference

https://pubmed.ncbi.nlm.nih.gov/25225496

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3389/FPLS.2014.00372

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

8 October 2017

ResearchGate publication ID

0 references

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