(Q51909008)

17 April 2018

title

Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes. (English)

1 reference

17 April 2018

1 reference

Angela Chaparro-Garcia

6

object named as

Angela Chaparro-Garcia

1 reference

17 April 2018

Sophien Kamoun

9

object named as

Sophien Kamoun

1 reference

17 April 2018

author name string

Joe Win

1

1 reference

17 April 2018

William Morgan

2

1 reference

17 April 2018

Jorunn Bos

3

1 reference

17 April 2018

Ksenia V Krasileva

4

1 reference

17 April 2018

Liliana M Cano

5

1 reference

17 April 2018

Randa Ammar

7

1 reference

17 April 2018

Brian J Staskawicz

8

1 reference

17 April 2018

language of work or name

1 reference

3 August 2007

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17 April 2018

published in

The Plant Cell

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17 April 2018

volume

19

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17 April 2018

page(s)

2349-2369

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17 April 2018

issue

8

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17 April 2018

Type III effector diversification via both pathoadaptation and horizontal transfer in response to a coevolutionary arms race

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The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana.

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4 October 2018

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4 October 2018

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4 October 2018

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4 October 2018

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A root-knot nematode secretory peptide functions as a ligand for a plant transcription factor.

4 October 2018

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4 October 2018

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4 October 2018

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A catalogue of the effector secretome of plant pathogenic oomycetes

4 October 2018

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4 October 2018

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Computational and comparative analyses of 150 full-length cDNA sequences from the oomycete plant pathogen Phytophthora infestans

4 October 2018

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4 October 2018

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Phytophthora ramorum: integrative research and management of an emerging pathogen in California and Oregon forests

4 October 2018

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Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines.

4 October 2018

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An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm

4 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

Scoredist: a simple and robust protein sequence distance estimator

4 October 2018

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Comparative genomics enabled the isolation of the R3a late blight resistance gene in potato.

4 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

Adaptive evolution in the SRZ chemoreceptor families of Caenorhabditis elegans and Caenorhabditis briggsae

4 October 2018

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Bayes empirical bayes inference of amino acid sites under positive selection

4 October 2018

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Host-parasite coevolutionary conflict between Arabidopsis and downy mildew.

4 October 2018

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A host-targeting signal in virulence proteins reveals a secretome in malarial infection

4 October 2018

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Targeting malaria virulence and remodeling proteins to the host erythrocyte

4 October 2018

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Selection on Glycine beta-1,3-endoglucanase genes differentially inhibited by a Phytophthora glucanase inhibitor protein.

4 October 2018

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Molecular population genetic analysis differentiates two virulence mechanisms of the fungal avirulence gene NIP1.

4 October 2018

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Multiple genetic processes result in heterogeneous rates of evolution within the major cluster disease resistance genes in lettuce

4 October 2018

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Diverse evolutionary mechanisms shape the type III effector virulence factor repertoire in the plant pathogen Pseudomonas syringae

4 October 2018

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Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences

4 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

The maintenance of extreme amino acid diversity at the disease resistance gene, RPP13, in Arabidopsis thaliana

4 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

The Avr1b locus of Phytophthora sojae encodes an elicitor and a regulator required for avirulence on soybean plants carrying resistance gene Rps1b

4 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

The Melampsora lini AvrL567 avirulence genes are expressed in haustoria and their products are recognized inside plant cells.

4 October 2018

1 reference

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The Pfam protein families database

4 October 2018

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High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance.

4 October 2018

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EST mining and functional expression assays identify extracellular effector proteins from the plant pathogen Phytophthora

4 October 2018

1 reference

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Molecular genetics of pathogenic oomycetes

4 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

4 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

Characterization and evolutionary analysis of a large polygalacturonase gene family in the oomycete plant pathogen Phytophthora cinnamomi

4 October 2018

1 reference

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Statistical methods for detecting molecular adaptation

4 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2002621

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4 October 2018

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Agroinfiltration is a versatile tool that facilitates comparative analyses of Avr9/Cf-9-induced and Avr4/Cf-4-induced necrosis

4 October 2018

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Effector proteins of phytopathogenic bacteria: bifunctional signals in virulence and host recognition

4 October 2018

1 reference

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Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

4 October 2018

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The specificity of polygalacturonase-inhibiting protein (PGIP): a single amino acid substitution in the solvent-exposed beta-strand/beta-turn region of the leucine-rich repeats (LRRs) confers a new recognition capability.

4 October 2018

1 reference

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4 October 2018

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Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

4 October 2018

1 reference

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Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

4 October 2018

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

4 October 2018

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4 October 2018

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

4 October 2018

1 reference

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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

4 October 2018

1 reference

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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

4 October 2018

1 reference

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Arms races between and within species

4 October 2018

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Patterns of Diversifying Selection in the Phytotoxin-like scr74 Gene Family of Phytophthora infestans

4 October 2018

1 reference

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A Molecular Phylogeny of Phytophthora and Related Oomycetes

30 November 2018

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PubMed

12 December 2020

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Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

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12 December 2020

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Identifiers

DOI

10.1105/TPC.107.051037

1 reference

17 April 2018

0 references

1 reference

17 April 2018