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McGenus: a Monte Carlo algorithm to predict RNA secondary structures with pseudoknots
scientific article published on 16 December 2012
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
title
McGenus: a Monte Carlo algorithm to predict RNA secondary structures with pseudoknots
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
main subject
Monte Carlo algorithm
1 reference
based on heuristic
inferred from title
author
Henri Orland
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
author name string
Michaël Bon
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
Cristian Micheletti
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
publication date
16 December 2012
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
volume
41
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
issue
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
page(s)
1895-1900
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
copyright license
Creative Commons Attribution-NonCommercial 3.0 Unported
start time
12 May 2017
1 reference
stated in
April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Analysis of energy-based algorithms for RNA secondary structure prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
Statistical evaluation of improvement in RNA secondary structure prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
TT2NE: a novel algorithm to predict RNA secondary structures with pseudoknots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
ProbKnot: fast prediction of RNA secondary structure including pseudoknots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
UNAFold: software for nucleic acid folding and hybridization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
RNA STRAND: the RNA secondary structure and statistical analysis database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
HotKnots: heuristic prediction of RNA secondary structures including pseudoknots.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
Mfold web server for nucleic acid folding and hybridization prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
RNA pseudoknot prediction in energy-based models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
How RNA folds
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
Complete suboptimal folding of RNA and the stability of secondary structures.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
A dynamic programming algorithm for RNA structure prediction including pseudoknots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
The equilibrium partition function and base pair binding probabilities for RNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
6 June 2018
Topology and prediction of RNA pseudoknots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
18 August 2018
Topological classification of RNA structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
18 August 2018
Predicting RNA secondary structures with pseudoknots by MCMC sampling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561945
retrieved
18 August 2018
tmRDB (tmRNA database)
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1093%2FNAR%2FGKS1204
retrieved
21 January 2018
Identifiers
DOI
10.1093/NAR/GKS1204
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
arXiv ID
1204.0993
1 reference
stated in
Unpaywall
PMC publication ID
3561945
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
PubMed publication ID
23248008
1 reference
stated in
Europe PubMed Central
PMC publication ID
3561945
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23248008%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 February 2020
ResearchGate publication ID
233941701
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