(Q41835048)

12 October 2017

Compound poisson approximation of the number of occurrences of a position frequency matrix (PFM) on both strands (English)

1 reference

12 October 2017

4

Martin Vingron

1 reference

12 October 2017

Utz J Pape

1

1 reference

12 October 2017

Sven Rahmann

series ordinal

2

1 reference

12 October 2017

Fengzhu Sun

series ordinal

3

1 reference

12 October 2017

1 July 2008

1 reference

Journal of Computational Biology

12 October 2017

1 reference

12 October 2017

15

1 reference

12 October 2017

6

1 reference

12 October 2017

547-564

1 reference

Fast index based algorithms and software for matching position specific scoring matrices

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

sFFT: a faster accurate computation of the p-value of the entropy score

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Efficient exact p-value computation for small sample, sparse, and surprising categorical data

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

WebLogo: A Sequence Logo Generator

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

TRANSFAC: transcriptional regulation, from patterns to profiles

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Probabilistic and statistical properties of words: an overview

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Over- and underrepresentation of short DNA words in herpesvirus genomes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Use of the ‘Perceptron’ algorithm to distinguish translational initiation sites inE. coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Linguistics of nucleotide sequences: morphology and comparison of vocabularies

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Methods for calculating the probabilities of finding patterns in sequences

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

The distribution of the frequency of occurrence of nucleotide subsequences, based on their overlap capability

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Exact computation of pattern probabilities in random sequences generated by Markov chains.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

A new statistical model to select target sequences bound by transcription factors.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Computing exact P-values for DNA motifs.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

On the power of profiles for transcription factor binding site detection.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Finding motifs in promoter regions.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Numerical comparison of several approximations of the word count distribution in random sequences.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

The statistical significance of nucleotide position-weight matrix matches.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2607244

Fast probabilistic analysis of sequence function using scoring matrices

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18631020

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1089/CMB.2007.0084

1 reference

12 October 2017

journals/jcb/PapeRSV08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

12 October 2017

PubMed publication ID

18631020

1 reference