(Q41851942)

13 October 2017

Translational stalling at polyproline stretches is modulated by the sequence context upstream of the stall site (English)

1 reference

13 October 2017

4

1 reference

13 October 2017

9

1 reference

13 October 2017

3

Lauri Peil

1 reference

13 October 2017

7

Jaanus Remme

1 reference

13 October 2017

Jürgen Lassak

2

0 references

Agata Starosta

object named as

Agata L Starosta

1

0 references

Tanel Tenson

object named as

Tanel Tenson

6

0 references

author name string

Kai Virumäe

5

1 reference

PMC publication ID

4176338

13 October 2017

Kirsten Jung

8

1 reference

13 October 2017

20 August 2014

1 reference

13 October 2017

Nucleic Acids Research

1 reference

13 October 2017

42

1 reference

13 October 2017

16

1 reference

13 October 2017

10711-10719

1 reference

Creative Commons Attribution 4.0 International

13 October 2017

start time

3 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4176338/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

The hypusine-containing translation factor eIF5A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Interactions of the TnaC nascent peptide with rRNA in the exit tunnel enable the ribosome to respond to free tryptophan

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Arrest peptides: cis-acting modulators of translation.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

eIF5A promotes translation of polyproline motifs.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Nascent peptides that block protein synthesis in bacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Lys34 of translation elongation factor EF-P is hydroxylated by YfcM.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Nascent peptide in the ribosome exit tunnel affects functional properties of the A-site of the peptidyl transferase center

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

pH-sensitivity of the ribosomal peptidyl transfer reaction dependent on the identity of the A-site aminoacyl-tRNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

A paralog of lysyl-tRNA synthetase aminoacylates a conserved lysine residue in translation elongation factor P

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

PoxA, YjeK, and Elongation Factor P Coordinately Modulate Virulence and Drug Resistance in Salmonella enterica

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Update on the Keio collection of Escherichia coli single-gene deletion mutants

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Functional significance of eIF5A and its hypusine modification in eukaryotes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

The plasticity of a translation arrest motif yields insights into nascent polypeptide recognition inside the ribosome tunnel

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Universal sample preparation method for proteome analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Programmed drug-dependent ribosome stalling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Slow peptide bond formation by proline and other N-alkylamino acids in translation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

The ribosomal exit tunnel functions as a discriminating gate

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Ribosome regulation by the nascent peptide

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Revised linkage map of Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Extension inhibition analysis of translation initiation complexes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

The X-Pro peptide bond as an nmr probe for conformational studies of flexible linear peptides

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

EF-P is essential for rapid synthesis of proteins containing consecutive proline residues

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Aromatic-proline interactions: electronically tunable CH/π interactions

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Modulation of the rate of peptidyl transfer on the ribosome by the nature of substrates

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Molecular mechanism of drug-dependent ribosome stalling

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Peptidyl-prolyl-tRNA at the ribosomal P-site reacts poorly with puromycin

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Side-chain effects on peptidyl-prolyl cis/trans isomerisation.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176338

Cis peptide bonds in proteins: residues involved, their conformations, interactions and locations

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25143529

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Local control of peptide conformation: stabilization of cis proline peptide bonds by aromatic proline interactions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25143529

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKU768

1 reference

13 October 2017

1 reference

PMC publication ID

4176338

13 October 2017

PubMed publication ID

25143529

1 reference

PMC publication ID

4176338