(Q41851955)

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Transcriptomic analysis of liquid non-sporulating Streptomyces coelicolor cultures demonstrates the existence of a complex differentiation comparable to that occurring in solid sporulating cultures

scientific article published on 21 January 2014

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scholarly article

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Europe PubMed Central

PMC publication ID

13 October 2017

Transcriptomic analysis of liquid non-sporulating Streptomyces coelicolor cultures demonstrates the existence of a complex differentiation comparable to that occurring in solid sporulating cultures (English)

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Europe PubMed Central

PMC publication ID

13 October 2017

0 references

Streptomyces parvulus

1 reference

Streptomyces coelicolor

1 reference

Streptomyces lividans

1 reference

Streptomyces albidoflavus

1 reference

Streptomyces werraensis

1 reference

Streptomyces avermitilis

1 reference

Streptomyces hiroshimensis

1 reference

undecylprodigiosin

1 reference

(2Z,5Z)-3-methoxy-5-pyrrol-2-ylidene-2-[(5-undecyl-1H-pyrrol-2-yl)methylidene]pyrrole

1 reference

Streptomyces anthocyanicus

1 reference

Antonio Rodríguez-García

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Ángel Manteca Fernández

7

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

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Paula Yagüe

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

María Teresa López-García

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Beatriz Rioseras

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Juan Francisco Martín

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Jesús Sánchez

6

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2 June 2020

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21 January 2014

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13 October 2017

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19 March 2024

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2 June 2020

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Europe PubMed Central

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2 June 2020

1

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2 June 2020

e86296

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

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Creative Commons Attribution 4.0 International

21 January 2014

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April 2022 Public Data File from Crossref

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limma

2 references

Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/3897704

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

online access status

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1371/journal.pone.0086296?email=unpaywall_01@example.com

access restriction status

1 reference

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Transcriptomic analysis of Streptomyces coelicolor differentiation in solid sporulating cultures: first compartmentalized and second multinucleated mycelia have different and distinctive transcriptomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Pre-sporulation stages of Streptomyces differentiation: state-of-the-art and future perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Insight into the Molecular Basis of Aromatic Polyketide Cyclization: Crystal Structure and in Vitro Characterization of WhiE-ORFVI

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

RNA-Seq and RNA immunoprecipitation analyses of the transcriptome of Streptomyces coelicolor identify substrates for RNase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

A novel two-component system involved in the transition to secondary metabolism in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Identification and biochemical characterization of Sco3487 from Streptomyces coelicolor A3(2), an exo- and endo-type β-agarase-producing neoagarobiose

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Activation of the SoxR regulon in Streptomyces coelicolor by the extracellular form of the pigmented antibiotic actinorhodin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

"Pseudo" gamma-butyrolactone receptors respond to antibiotic signals to coordinate antibiotic biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

New method for monitoring programmed cell death and differentiation in submerged Streptomyces cultures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

The dynamic architecture of the metabolic switch in Streptomyces coelicolor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Analysis and identification of ADP-ribosylated proteins of Streptomyces coelicolor M145.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Characterization of rrdA, a TetR family protein gene involved in the regulation of secondary metabolism in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Uncovering genes with divergent mRNA-protein dynamics in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Mycelium differentiation and antibiotic production in submerged cultures of Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

The global role of ppGpp synthesis in morphological differentiation and antibiotic production in Streptomyces coelicolor A3(2)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

New pleiotropic effects of eliminating a rare tRNA from Streptomyces coelicolor, revealed by combined proteomic and transcriptomic analysis of liquid cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Regulation of Streptomyces development: reach for the sky!

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Nur, a nickel-responsive regulator of the Fur family, regulates superoxide dismutases and nickel transport in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Cytological and biochemical evidence for an early cell dismantling event in surface cultures of Streptomyces antibioticus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

The pqrAB operon is responsible for paraquat resistance in Streptomyces coelicolor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Essential role of DivIVA in polar growth and morphogenesis in Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Two novel homologous proteins of Streptomyces coelicolor and Streptomyces lividans are involved in the formation of the rodlet layer and mediate attachment to a hydrophobic surface.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Mycelial differentiation and spore formation by Streptomyces brasiliensis in submerged culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Substrate induction and glucose repression of maltose utilization by Streptomyces coelicolor A3(2) is controlled by malR, a member of the lacl-galR family of regulatory genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Induction of actinorhodin production by rpsL (encoding ribosomal protein S12) mutations that confer streptomycin resistance in Streptomyces lividans and Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

The expanded horizon for microbial metabolites — a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

5 June 2018

Potent and specific inhibitors of protein kinase C of microbial origin

1 reference

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5 June 2018

A novel GlnR target gene, nnaR, is involved in nitrate/nitrite assimilation in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

The actinobacteria-specific gene wblA controls major developmental transitions in Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Quantitative proteome analysis of Streptomyces coelicolor Nonsporulating liquid cultures demonstrates a complex differentiation process comparable to that occurring in sporulating solid cultures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

The complex whiJ locus mediates environmentally sensitive repression of development of Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Role of nsdA in negative regulation of antibiotic production and morphological differentiation in Streptomyces bingchengensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Functional expression of SAV3818, a putative TetR-family transcriptional regulatory gene from Streptomyces avermitilis, stimulates antibiotic production in Streptomyces species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

NepA is a structural cell wall protein involved in maintenance of spore dormancy in Streptomyces coelicolor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

SarA influences the sporulation and secondary metabolism in Streptomyces coelicolor M145.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Ligand recognition by ActR, a TetR-like regulator of actinorhodin export

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Evolutionary flux of potentially bldA-dependent Streptomyces genes containing the rare leucine codon TTA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Phosphorylation of AfsR by multiple serine/threonine kinases in Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

The polyphosphate kinase plays a negative role in the control of antibiotic production in Streptomyces lividans.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Viability, strength, and fragmentation of Saccharopolyspora erythraea in submerged fermentation

1 reference

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18 August 2018

Defining the disulphide stress response in Streptomyces coelicolor A3(2): identification of the sigmaR regulon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Duplicated gene clusters suggest an interplay of glycogen and trehalose metabolism during sequential stages of aerial mycelium development in Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897704

18 August 2018

Proteins encoded by the conservon of Streptomyces coelicolor A3(2) comprise a membrane-associated heterocomplex that resembles eukaryotic G protein-coupled regulatory system

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence recognition, cooperative interaction, and dimerization of the initiator protein DnaA of Streptomyces

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of cellular differentiation and apoptosis by signal transduction inhibitors

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional and preliminary functional analysis of the six genes located in divergence of phoR/phoP in Streptomyces lividans

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mutation of Streptomyces lividans which prevents intraplasmid recombination has no effect on chromosomal recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional Expression of SAV3818, a Putative TetR-Family Transcriptional Regulatory Gene from Streptomyces avermitilis, Stimulates Antibiotic Production in Streptomyces Species

1 reference

12 April 2024

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PONE.0086296

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10.1371/JOURNAL.PONE.0086296

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

2014PLoSO...986296Y

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24466012%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

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