(Q41862416)

13 October 2017

SA-Mot: a web server for the identification of motifs of interest extracted from protein loops (English)

1 reference

13 October 2017

1 reference

Adrien Saladin

2

0 references

Julien Maupetit

object named as

Julien Maupetit

3

0 references

author name string

Leslie Regad

1

1 reference

13 October 2017

Colette Geneix

4

1 reference

13 October 2017

Anne-Claude Camproux

5

1 reference

13 October 2017

language of work or name

1 reference

10 June 2011

1 reference

13 October 2017

Nucleic Acids Research

1 reference

13 October 2017

39

1 reference

13 October 2017

Web Server issue

1 reference

13 October 2017

W203-9

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

13 October 2017

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Dissecting protein loops with a statistical scalpel suggests a functional implication of some structural motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Deciphering the shape and deformation of secondary structures through local conformation analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

CDD: a Conserved Domain Database for the functional annotation of proteins

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Exact distribution of a pattern in a set of random sequences generated by a Markov source: applications to biological data

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Mining protein loops using a structural alphabet and statistical exceptionality

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Structural deformation upon protein-protein interaction: a structural alphabet approach

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

5 June 2018

The 20 years of PROSITE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

MegaMotifBase: a database of structural motifs in protein families and superfamilies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Numerical solutions for patterns statistics on Markov chains

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

SA-Search: a web tool for protein structure mining based on a Structural Alphabet

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

CD-Search: protein domain annotations on the fly

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

WebLogo: A Sequence Logo Generator

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

A hidden markov model derived structural alphabet for proteins.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

5 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Dali: a network tool for protein structure comparison

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

SCOP: a structural classification of proteins database for the investigation of sequences and structures

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Statistical analyses of counts and distributions of restriction sites in DNA sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

A fast method for large-scale de novo peptide and miniprotein structure prediction.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

PEP-FOLD: an online resource for de novo peptide structure prediction.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Predicting small ligand binding sites in proteins using backbone structure

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Automated discovery of 3D motifs for protein function annotation

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125790

Taking advantage of local structure descriptors to analyze interresidue contacts in protein structures and protein complexes

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21665924

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKR410

1 reference

13 October 2017

journals/nar/RegadSMGC11

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

13 October 2017

PubMed publication ID

21665924

1 reference