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English
DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra.
scientific article published on 7 January 2014
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
title
DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
main subject
open-source software
0 references
graphical user interface
1 reference
based on heuristic
inferred from title
author
Erdmann Rapp
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Christian G Huber
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Thilo Muth
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Lennart Martens
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Marc Vaudel
series ordinal
6
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Harald Barsnes
series ordinal
7
object named as
Harald Barsnes
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
author name string
Lisa Weilnböck
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
publication date
7 January 2014
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
number of pages
4
1 reference
based on heuristic
inferred from page(s)
published in
Journal of Proteome Research
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
volume
13
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
issue
2
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
page(s)
1143-1146
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
cites work
Searching for a needle in a stack of needles: challenges in metaproteomics data analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
retrieved
5 June 2018
Algorithms for the de novo sequencing of peptides from tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
retrieved
5 June 2018
compomics-utilities: an open-source Java library for computational proteomics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
Discovery and revision of Arabidopsis genes by proteogenomics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
A la carte proteomics with an emphasis on gel-free techniques
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
Improving the reliability and throughput of mass spectrometry-based proteomics by spectrum quality filtering
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5 June 2018
Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides
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5 June 2018
PepNovo: de novo peptide sequencing via probabilistic network modeling
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
Open mass spectrometry search algorithm
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
What to do with "one-hit wonders"?
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5 June 2018
TANDEM: matching proteins with tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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5 June 2018
Mass spectrometry-based proteomics
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5 June 2018
SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches.
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18 August 2018
The PSI-MOD community standard for representation of protein modification data.
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18 August 2018
Performance evaluation of existing de novo sequencing algorithms.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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18 August 2018
Monolithic capillary columns for liquid chromatography-electrospray ionization mass spectrometry in proteomic and genomic research
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923451
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18 August 2018
Identifiers
DOI
10.1021/PR4008078
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
PMCID
3923451
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
PubMed ID
24295440
1 reference
stated in
Europe PubMed Central
PMCID
3923451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24295440%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
ResearchGate publication ID
259112298
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