(Q41972949)

14 October 2017

Psi-constrained simulations of protein folding transition states: implications for calculating (English)

1 reference

14 October 2017

0 references

3

Tobin R Sosnick

1 reference

14 October 2017

2

Karl F Freed

1 reference

14 October 2017

Michael C Baxa

1

1 reference

PMC publication ID

2742336

14 October 2017

language of work or name

English

0 references

publication date

1 March 2009

1 reference

Journal of Molecular Biology

14 October 2017

1 reference

14 October 2017

386

1 reference

14 October 2017

4

1 reference

14 October 2017

920-928

1 reference

Quantifying the structural requirements of the folding transition state of protein A and other systems

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Kinetic barriers and the role of topology in protein and RNA folding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Characterizing the protein folding transition state using psi analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Statistical coil model of the unfolded state: resolving the reconciliation problem

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Phi value versus psi analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Differences in the folding transition state of ubiquitin indicated by phi and psi analyses

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Discerning the structure and energy of multiple transition states in protein folding using psi-analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Alpha-helical stabilization by side chain shielding of backbone hydrogen bonds

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Engineered metal binding sites map the heterogeneous folding landscape of a coiled coil

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Transition state heterogeneity in GCN4 coiled coil folding studied by using multisite mutations and crosslinking

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Determination of the transition state ensemble for the folding of ubiquitin from a combination of Phi and Psi analyses

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Characterizing protein folding transition States using Psi-analysis.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Interpretation of protein folding psi values.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Ubiquitin folds through a highly polarized transition state.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

A simple method for faster nonbonded force evaluations

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742336

Small proteins fold through transition states with native-like topologies

18 August 2018

1 reference

12 December 2020

Phi-values for BPTI folding intermediates and implications for transition state analysis

1 reference

12 December 2020

All-atom fast protein folding simulations: the villin headpiece

1 reference

12 December 2020

Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin

1 reference

12 December 2020

10.1016/J.JMB.2009.01.010

Identifiers

DOI

1 reference

14 October 2017

1 reference

PMC publication ID

2742336

14 October 2017

PubMed publication ID

19244613

1 reference

PMC publication ID

2742336