(Q42049832)

English

Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.

scientific article published on January 2010

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47. (English)

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

2-naphthoyl-CoA

1 reference

ChEBI release 2020-05-28

5

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Tillmann Lueders

7

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

2

object named as

Nico Jehmlich

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

object named as

Frank Schmidt

4

0 references

Martin von Bergen

3

object named as

Martin von Bergen

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

author name string

Drazenka Selesi

1

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Patrick Tischler

6

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Rainer U Meckenstock

8

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

publication date

1 January 2010

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

192

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

1

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

295-306

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Anaerobic degradation of polycyclic aromatic hydrocarbons.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Subunit structure of benzylsuccinate synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic degradation of naphthalene and 2-methylnaphthalene by strains of marine sulfate-reducing bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Depth-resolved quantification of anaerobic toluene degraders and aquifer microbial community patterns in distinct redox zones of a tar oil contaminant plume.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

eggNOG: automated construction and annotation of orthologous groups of genes

1 reference

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5 June 2018

Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site

1 reference

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5 June 2018

Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Adding handles to unhandy substrates: anaerobic hydrocarbon activation mechanisms

1 reference

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5 June 2018

Comparison of mechanisms of alkane metabolism under sulfate-reducing conditions among two bacterial isolates and a bacterial consortium

1 reference

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5 June 2018

Dearomatizing benzene ring reductases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

New glycyl radical enzymes catalysing key metabolic steps in anaerobic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic degradation of aromatic compounds by magnetospirillum strains: isolation and degradation genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Key enzymes in the anaerobic aromatic metabolism catalysing Birch-like reductions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

ARB: a software environment for sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

2-Oxoglutarate:NADP + Oxidoreductase in Azoarcus evansii : Properties and Function in Electron Transfer Reactions in Aromatic Ring Reduction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic degradation of ethylbenzene by a new type of marine sulfate-reducing bacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

(R)-Benzylsuccinyl-CoA dehydrogenase of Thauera aromatica, an enzyme of the anaerobic toluene catabolic pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic oxidation of aromatic compounds and hydrocarbons.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Identical ring cleavage products during anaerobic degradation of naphthalene, 2-methylnaphthalene, and tetralin indicate a new metabolic pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Benzylsuccinate synthase of Azoarcus sp. strain T: cloning, sequencing, transcriptional organization, and its role in anaerobic toluene and m-xylene mineralization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic initial reaction of n-alkanes in a denitrifying bacterium: evidence for (1-methylpentyl)succinate as initial product and for involvement of an organic radical in n-hexane metabolism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic degradation of 2-methylnaphthalene by a sulfate-reducing enrichment culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Genes involved in anaerobic metabolism of phenol in the bacterium Thauera aromatica

1 reference

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5 June 2018

Anaerobic naphthalene degradation by a sulfate-reducing enrichment culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Archaeal population dynamics during sequential reduction processes in rice field soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic naphthalene degradation by microbial pure cultures under nitrate-reducing conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Transcriptional analysis of the tutE tutFDGH gene cluster from Thauera aromatica strain T1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic toluene catabolism of Thauera aromatica: the bbs operon codes for enzymes of beta oxidation of the intermediate benzylsuccinate

1 reference

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5 June 2018

Initial reactions in anaerobic oxidation of m-xylene by the denitrifying bacterium Azoarcus sp. strain T.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Biochemical and genetic characterization of benzylsuccinate synthase from Thauera aromatica: a new glycyl radical enzyme catalysing the first step in anaerobic toluene metabolism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Identification and analysis of genes involved in anaerobic toluene metabolism by strain T1: putative role of a glycine free radical

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Carboxylation as an initial reaction in the anaerobic metabolism of naphthalene and phenanthrene by sulfidogenic consortia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

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1 reference

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The sugar kinase/heat shock protein 70/actin superfamily: implications of conserved structure for mechanism

1 reference

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5 June 2018

Anaerobic degradation of ethylbenzene and other aromatic hydrocarbons by new denitrifying bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

A one-step, low background coomassie staining procedure for polyacrylamide gels.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

16S ribosomal DNA amplification for phylogenetic study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

5 June 2018

Anaerobic degradation of the aromatic hydrocarbon biphenyl by a sulfate-reducing enrichment culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Anaerobic alkane-degrading strain AK-01 contains two alkylsuccinate synthase genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Anaerobic phenanthrene mineralization by a carboxylating sulfate-reducing bacterial enrichment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Genes encoding the candidate enzyme for anaerobic activation of n-alkanes in the denitrifying bacterium, strain HxN1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Degradative capacities and bioaugmentation potential of an anaerobic benzene-degrading bacterium strain DN11.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

17 August 2018

Identification and expression of benzylsuccinate synthase genes in a toluene-degrading methanogenic consortium

1 reference

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Methylation is the initial reaction in anaerobic naphthalene degradation by a sulfate-reducing enrichment culture

1 reference

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Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

17 August 2018

Enzymatic reactions in anaerobic 2-methylnaphthalene degradation by the sulphate-reducing enrichment culture N 47.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

17 August 2018

Genes involved in the anaerobic degradation of toluene in a denitrifying bacterium, strain EbN1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

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Specific 16S rDNA sequences associated with naphthalene degradation under sulfate-reducing conditions in harbor sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

17 August 2018

Operon structure and expression of the genes for benzylsuccinate synthase in Thauera aromatica strain K172.

1 reference

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17 August 2018

A stable organic free radical in anaerobic benzylsuccinate synthase of Azoarcus sp. strain T.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2798259

17 August 2018

Anaerobic degradation of naphthalene by a pure culture of a novel type of marine sulphate-reducing bacterium

1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/19854898

12 December 2020

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10.1128/JB.00874-09

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Europe PubMed Central

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15 October 2017

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24 November 2022

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15 October 2017

PubMed publication ID

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Europe PubMed Central

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15 October 2017

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