(Q42054604)

15 October 2017

RosettaHoles: rapid assessment of protein core packing for structure prediction, refinement, design, and validation (English)

1 reference

protein structure prediction

15 October 2017

0 references

0 references

David Baker

2

0 references

author name string

Will Sheffler

series ordinal

1

1 reference

15 October 2017

1 January 2009

1 reference

15 October 2017

1 reference

15 October 2017

18

1 reference

15 October 2017

1

1 reference

15 October 2017

229-239

1 reference

Crystallography: crystallographic evidence for deviating C3b structure

15 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Protein structure prediction using Rosetta

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

5 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Analytical shape computation of macromolecules: II. Inaccessible cavities in proteins.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Analytical shape computation of macromolecules: I. Molecular area and volume through alpha shape.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Errors in protein structures

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

RASMOL: biomolecular graphics for all

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

The interpretation of protein structures: Estimation of static accessibility

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Energetics of complementary side-chain packing in a protein hydrophobic core

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2708028

Proceedings of the Seventh Meeting on the Critical Assessment of Techniques for Protein Structure Prediction. November 26-30, 2006. Pacific Grove, California, USA

5 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19177366

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A training algorithm for optimal margin classifiers

1 reference

9 October 2024

https://opencitations.net/index/api/v1/references/10.1002/PRO.8

Identifiers

DOI

10.1002/PRO.8

1 reference

15 October 2017

1 reference

PMC publication ID

2708028

15 October 2017

PubMed publication ID

19177366

1 reference

PMC publication ID

2708028