(Q42131642)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Dissecting the protein-RNA interface: the role of protein surface shapes and RNA secondary structures in protein-RNA recognition (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1

1 reference

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19 January 2020

author name string

Hiroki Tateishi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Anirban Chakraborty

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Prakash Patil

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Naoya Kenmochi

5

1 reference

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19 January 2020

publication date

22 December 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

published in

Nucleic Acids Research

1 reference

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19 January 2020

volume

40

1 reference

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19 January 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

page(s)

3299-3306

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

19 January 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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The role of DNA shape in protein-DNA recognition

29 May 2018

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The interwinding nature of protein-protein interfaces and its implication for protein complex formation.

29 May 2018

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Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins

29 May 2018

1 reference

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Cavities in protein-DNA and protein-RNA interfaces

29 May 2018

1 reference

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29 May 2018

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Prediction of interacting single-stranded RNA bases by protein-binding patterns

29 May 2018

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Dissecting protein-RNA recognition sites

29 May 2018

1 reference

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Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry.

29 May 2018

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Inference of macromolecular assemblies from crystalline state

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

Amino acid residue doublet propensity in the protein-RNA interface and its application to RNA interface prediction

29 May 2018

1 reference

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Sequence-specific binding of single-stranded RNA: is there a code for recognition?

29 May 2018

1 reference

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Prediction of RNA binding sites in proteins from amino acid sequence

29 May 2018

1 reference

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Post-transcriptional control of gene expression: a genome-wide perspective.

29 May 2018

1 reference

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PISCES: recent improvements to a PDB sequence culling server

29 May 2018

1 reference

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A unique RNA Fold in the RumA-RNA-cofactor ternary complex contributes to substrate selectivity and enzymatic function

29 May 2018

1 reference

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Tools for the automatic identification and classification of RNA base pairs

29 May 2018

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Recognition of specific DNA sequences.

29 May 2018

1 reference

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Structure-based analysis of protein-RNA interactions using the program ENTANGLE.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

Geometric nomenclature and classification of RNA base pairs

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

29 May 2018

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1 reference

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The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

Crystal structure of the spliceosomal U2B"-U2A' protein complex bound to a fragment of U2 small nuclear RNA

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

Satisfying hydrogen bonding potential in proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3333874

The role of RNA sequence and structure in RNA--protein interactions.

29 May 2018

1 reference

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Prediction of protein-RNA binding sites by a random forest method with combined features

17 August 2018

1 reference

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Optimal protein-RNA area, OPRA: a propensity-based method to identify RNA-binding sites on proteins

17 August 2018

1 reference

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Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures

17 August 2018

1 reference

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17 August 2018

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17 August 2018

1 reference

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Genetic probing of the interaction between the translation factor SelB and its mRNA binding element in Escherichia coli

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22199255

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Protein-RNA interactions: structural analysis and functional classes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22199255

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKR1225

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22199255%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

22199255

1 reference