(Q42232921)

19 October 2017

Monte Carlo simulations of peptide-membrane interactions with the MCPep web server (English)

1 reference

19 October 2017

1 reference

Nir Ben-Tal

3

0 references

Türkan Haliloğlu

series ordinal

2

object named as

Turkan Haliloglu

1 reference

19 October 2017

1

Yana Gofman

1 reference

19 October 2017

13 June 2012

1 reference

19 October 2017

Nucleic Acids Research

1 reference

19 October 2017

40

1 reference

19 October 2017

Web Server issue

1 reference

19 October 2017

W358-63

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

19 October 2017

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Antimicrobial and cell-penetrating peptides: structure, assembly and mechanisms of membrane lysis via atomistic and coarse-grained molecular dynamics simulations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Improved prediction of protein side-chain conformations with SCWRL4

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Is assembly of the SNARE complex enough to fuel membrane fusion?

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Molecular form follows function: (un)snaring the SNAREs

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Membrane proteins: molecular dynamics simulations.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Molecular anatomy of a trafficking organelle

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

SNAREs--engines for membrane fusion

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Protein structure prediction: inroads to biology.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Monte Carlo studies of folding, dynamics, and stability in alpha-helices

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Computational studies of membrane channels

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Increased concentration of polyvalent phospholipids in the adsorption domain of a charged protein

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Interactions of hydrophobic peptides with lipid bilayers: Monte Carlo simulations with M2delta

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Protein–lipid interactions studied with designed transmembrane peptides: role of hydrophobic matching and interfacial anchoring (Review)

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Implicit solvent model studies of the interactions of the influenza hemagglutinin fusion peptide with lipid bilayers

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Calculations suggest a pathway for the transverse diffusion of a hydrophobic peptide across a lipid bilayer

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Lipid demixing and protein-protein interactions in the adsorption of charged proteins on mixed membranes

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Continuum solvent model calculations of alamethicin-membrane interactions: thermodynamic aspects

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Binding of peripheral proteins to mixed lipid membranes: effect of lipid demixing upon binding

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Free-energy determinants of alpha-helix insertion into lipid bilayers

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

A molecular model for lipid-protein interaction in membranes: the role of hydrophobic mismatch

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

The fluid mosaic model of the structure of cell membranes

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Interactions of cationic-hydrophobic peptides with lipid bilayers: a Monte Carlo simulation method

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Short-range conformational energies, secondary structure propensities, and recognition of correct sequence-structure matches

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Interaction of an antimicrobial peptide with membranes: experiments and simulations with NKCS.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

A combined pulse EPR and Monte Carlo simulation study provides molecular insight on peptide-membrane interactions

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Energetics of hydrophobic matching in lipid-protein interactions

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Elastic curvature constants of lipid monolayers and bilayers.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Membrane Interactions of Novicidin, a Novel Antimicrobial Peptide: Phosphatidylglycerol Promotes Bilayer Insertion

17 August 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS577

Equation of State Calculations by Fast Computing Machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS577

Skeletal muscle NAD(P)H two-photon fluorescence microscopy in vivo: topology and optical inner filters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS577

Calculation of Alkane to Water Solvation Free Energies Using Continuum Solvent Models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS577

Stability of an Ion Channel in Lipid Bilayers: Implicit Solvent Model Calculations with Gramicidin†

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS577

Membrane integration of a mitochondrial signal-anchored protein does not require additional proteinaceous factors

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394254

Energetics and dynamics of SNAREpin folding across lipid bilayers

1 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22695797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKS577

1 reference

19 October 2017

journals/nar/GofmanHB12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

3394254

19 October 2017

PubMed publication ID

22695797

1 reference

PMC publication ID

3394254