(Q42586552)

3 November 2017

Depletion effects massively change chromatin properties and influence genome folding (English)

1 reference

3 November 2017

Philipp M Diesinger

1

1 reference

PMCID

2764066

3 November 2017

Dieter W Heermann

series ordinal

2

1 reference

PMCID

2764066

3 November 2017

language of work or name

English

0 references

publication date

1 October 2009

1 reference

3 November 2017

1 reference

3 November 2017

97

1 reference

3 November 2017

8

1 reference

3 November 2017

2146-2153

1 reference

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

3 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

The influence of the cylindrical shape of the nucleosomes and H1 defects on properties of chromatin

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

A genomic code for nucleosome positioning

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Direct observation of DNA distortion by the RSC complex

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Structure and dynamic properties of nucleosome core particles

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Nucleosome arrays reveal the two-start organization of the chromatin fiber

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

The structure of DNA in the nucleosome core

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Role of DNA sequence in nucleosome stability and dynamics

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Translating the Histone Code

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

DNA folding: structural and mechanical properties of the two-angle model for chromatin

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromatin fiber structure: morphology, molecular determinants, structural transitions.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Crystal structure of the nucleosome core particle at 2.8 A resolution

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

What determines the folding of the chromatin fiber?

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromatin higher order structure: chasing a mirage?

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Sequence-dependent deformational anisotropy of chromatin DNA.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Sequence periodicities in chicken nucleosome core DNA.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopy

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Solenoidal model for superstructure in chromatin

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Chromatin history: our view from the bridge

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764066

Structure of the 300A chromatin filament: X-ray diffraction from oriented samples

16 August 2018

1 reference

12 December 2020

Physicochemical studies of the folding of the 100 A nucleosome filament into the 300 A filament. Cation dependence

1 reference

12 December 2020

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast

1 reference

12 December 2020

Two-angle model and phase diagram for chromatin

1 reference

12 December 2020

10.1016/J.BPJ.2009.06.057

Identifiers

DOI

1 reference

Fatcat

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30 July 2022

release_xo7ichcb4jbo3dq467m4mh2j3a

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/xo7ichcb4jbo3dq467m4mh2j3a

30 July 2022

https://api.fatcat.wiki/v0/release/xo7ichcb4jbo3dq467m4mh2j3a

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/xo7ichcb4jbo3dq467m4mh2j3a

1 reference

30 July 2022