(Q42634358)

4 November 2017

title

From proteomics data representation to public data flow: a report on the HUPO-PSI workshop September 2011, Geneva, Switzerland (English)

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Juan Antonio Vizcaíno

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Pierre-Alain Binz

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Sandra Orchard

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Sandra Orchard

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Eric W Deutsch

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Eric W Deutsch

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Salvador Martínez De Bartolomé

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Salvador Martinez-Bartolomé

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Martin Eisenacher

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Juan-Pablo Albar

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4 November 2017

publication date

1 February 2012

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4 November 2017

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volume

12

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4 November 2017

issue

3

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4 November 2017

page(s)

351-355

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The minimum information about a proteomics experiment (MIAPE)

4 November 2017

cites work

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

The minimum information required for reporting a molecular interaction experiment (MIMIx).

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

Minimum information about a bioactive entity (MIABE).

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

PSICQUIC and PSISCORE: accessing and scoring molecular interactions

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

mzML--a community standard for mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

jmzML, an open-source Java API for mzML, the PSI standard for MS data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

imzML: Imaging Mass Spectrometry Markup Language: A common data format for mass spectrometry imaging.

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

Guidelines for reporting the use of mass spectrometry in proteomics.

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

Guidelines for reporting the use of mass spectrometry informatics in proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

mzIdentML: an open community-built standard format for the results of proteomics spectrum identification algorithms

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

A DIGE study on the effects of salbutamol on the rat muscle proteome - an exemplar of best practice for data sharing in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

PRIDE Converter: making proteomics data-sharing easy

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

The Proteomics Identifications Database (PRIDE) and the ProteomExchange Consortium: making proteomics data accessible.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201290016

Minimum information about a protein affinity reagent (MIAPAR)

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

OpenMS and TOPP: Open Source Software for LC-MS Data Analysis

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

Semi-automatic tool to describe, store and compare proteomics experiments based on MIAPE compliant reports

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201290016

21 January 2018

Identifiers

DOI

10.1002/PMIC.201290016

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4 November 2017

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