(Q42774833)

12 November 2017

Single-cell RNA-seq supports a developmental hierarchy in human oligodendroglioma (English)

1 reference

single cell transcriptomics

12 November 2017

0 references

1 reference

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

1 reference

33

1 reference

PubMed publication ID

7 November 2017

22

Rahul Satija

0 references

Itay Tirosh

1

Itay Tirosh

0 references

Aviv Regev

37

Aviv Regev

1 reference

12 November 2017

Orit Rozenblatt-Rosen

32

Orit Rozenblatt-Rosen

1 reference

12 November 2017

Aanand A Patel

17

0 references

Christopher W Mount

Christopher Mount

9

0 references

Brian V. Nahed

Brian V Nahed

23

0 references

Michelle Monje

34

Michelle Monje

1 reference

12 November 2017

31

Gad Getz

1 reference

12 November 2017

25

Robert L Martuza

1 reference

12 November 2017

29

Todd R Golub

1 reference

12 November 2017

14

Benjamin Izar

1 reference

12 November 2017

5

Anoop P Patel

1 reference

12 November 2017

6

Keren Yizhak

1 reference

12 November 2017

10

Mariella G Filbin

1 reference

12 November 2017

11

Cyril Neftel

1 reference

12 November 2017

15

Christina C Luo

1 reference

12 November 2017

24

William T Curry

1 reference

12 November 2017

26

Ravindra Mylvaganam

1 reference

12 November 2017

35

Bradley E Bernstein

1 reference

12 November 2017

36

David N Louis

1 reference

12 November 2017

38

Mario L Suvà

1 reference

12 November 2017

28

Matthew P Frosch

1 reference

12 November 2017

20

Kenneth J Livak

1 reference

12 November 2017

Andrew S Venteicher

2

1 reference

12 November 2017

Christine Hebert

3

1 reference

12 November 2017

Leah E Escalante

4

1 reference

12 November 2017

Jonathan M Fisher

7

1 reference

12 November 2017

Christopher Rodman

8

1 reference

12 November 2017

Niyati Desai

12

1 reference

12 November 2017

Jackson Nyman

13

1 reference

12 November 2017

Joshua M Francis

16

1 reference

12 November 2017

Maristela L Onozato

18

1 reference

12 November 2017

Nicolo Riggi

19

1 reference

12 November 2017

Dave Gennert

21

1 reference

12 November 2017

A John Iafrate

27

1 reference

12 November 2017

Miguel N Rivera

30

1 reference

12 November 2017

language of work or name

English

0 references

publication date

2 November 2016

1 reference

external data available at URL

12 November 2017

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70630

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

1 reference

12 November 2017

539

1 reference

12 November 2017

7628

1 reference

12 November 2017

309-313

1 reference

describes a project that uses

12 November 2017

brain

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

SMART-Seq

1 reference

A curated database reveals trends in single-cell transcriptomics

https://scigraph.springernature.com/pub.10.1038/nature20123

7 February 2021

exact match

0 references

cites work

The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Cancer stem cells in glioblastoma

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

A survey of human brain transcriptome diversity at the single cell level

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Spatial reconstruction of single-cell gene expression data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Oncotator: cancer variant annotation tool

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Transcriptional landscape of the prenatal human brain

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Evolution of the cancer stem cell model

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Full-length RNA-seq from single cells using Smart-seq2.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Identification of a unique TGF-β-dependent molecular and functional signature in microglia

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Epigenetic reprogramming in cancer

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Dedifferentiation of neurons and astrocytes by oncogenes can induce gliomas in mice

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

The critical role of cyclin D2 in cell cycle progression and tumorigenicity of glioblastoma stem cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Absolute quantification of somatic DNA alterations in human cancer

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Asymmetry-defective oligodendrocyte progenitors are glioma precursors

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Mutations in CIC and FUBP1 contribute to human oligodendroglioma

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

ContEst: estimating cross-contamination of human samples in next-generation sequencing data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Mosaic analysis with double markers reveals tumor cell of origin in glioma

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Cdks and cyclins link G1 length and differentiation of embryonic, neural and hematopoietic stem cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

The Sequence Alignment/Map format and SAMtools

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Fast and accurate short read alignment with Burrows-Wheeler transform

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Glioma test array for use with formalin-fixed, paraffin-embedded tissue: array comparative genomic hybridization correlates with loss of heterozygosity and fluorescence in situ hybridization

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Identification of genes periodically expressed in the human cell cycle and their expression in tumors

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

ETV/Pea3 family transcription factor-encoding genes are overexpressed in CIC-mutant oligodendrogliomas.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

The chromatin remodeler CHD7 regulates adult neurogenesis via activation of SoxC transcription factors

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

An aberrant transcription factor network essential for Wnt signaling and stem cell maintenance in glioblastoma.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Autocrine TGF-beta signaling maintains tumorigenicity of glioma-initiating cells through Sry-related HMG-box factors.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

Expression of oligodendroglial and astrocytic lineage markers in diffuse gliomas: use of YKL-40, ApoE, ASCL1, and NKX2-2.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5465819

16 August 2018

Identifiers

DOI

10.1038/NATURE20123

1 reference

Dimensions Publication ID

12 November 2017

1016261116

0 references

Fatcat ID

release_s5f7frwg6jc7znzbwgdbzmylze

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/s5f7frwg6jc7znzbwgdbzmylze

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

12 November 2017

PubMed publication ID

27806376

1 reference