(Q42844242)

8 November 2017

Harmonic and anharmonic aspects in the dynamics of BPTI: a normal mode analysis and principal component analysis (English)

1 reference

PMCID

2142881

8 November 2017

Harmonic and anharmonic aspects in the dynamics of BPTI: A normal mode analysis and principal component analysis (English)

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

principal component analysis

14 May 2024

main subject

0 references

1

S. Hayward

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

14 May 2024

2

A. Kitao

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

14 May 2024

author name string

N. Go

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

14 May 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=7520795

14 May 2024

publication date

1 June 1994

1 reference

PMCID

2142881

full work available at URL

8 November 2017

https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pro.5560030608

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

https://europepmc.org/articles/PMC2142881

14 May 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

https://europepmc.org/articles/PMC2142881?pdf=render

14 May 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7520795

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2Fpro.5560030608

14 May 2024

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

https://onlinelibrary.wiley.com/doi/pdf/10.1002/pro.5560030608

14 May 2024

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

14 May 2024

1 reference

8 November 2017

3

1 reference

8 November 2017

6

1 reference

8 November 2017

936-943

1 reference

Essential dynamics of proteins

8 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Harmonic dynamics of proteins: normal modes and fluctuations in bovine pancreatic trypsin inhibitor

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Dynamics of a small globular protein in terms of low-frequency vibrational modes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Structural basis of hierarchical multiple substates of a protein. I: Introduction.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Structural basis of hierarchical multiple substates of a protein. V: Nonlocal deformations.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Structural basis of hierarchical multiple substates of a protein. III: Side chain and main chain local conformations.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Refinement of protein dynamic structure: normal mode refinement

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Projection of Monte Carlo and molecular dynamics trajectories onto the normal mode axes: human lysozyme

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Normal mode refinement: crystallographic refinement of protein dynamic structure. II. Application to human lysozyme

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Normal mode refinement: crystallographic refinement of protein dynamic structure. I. Theory and test by simulated diffraction data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Solution structure of a calmodulin-target peptide complex by multidimensional NMR

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Effect of solvent on collective motions in globular protein.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142881

Dynamics of ligand binding to myoglobin

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/7520795

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/7520795

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Crystals of haemoglobin with the T quaternary structure bind oxygen noncooperatively with no Bohr effect

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/7520795

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular dynamics with coupling to an external bath

3

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

Crystallographic refinement of the structure of bovine pancreatic trypsin inhibitor at l.5 Å resolution

14 May 2024

6

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

14 May 2024

12

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

Structural basis of hierarchical multiple substates of a protein. II: Monte Carlo simulation of native thermal fluctuations and energy minimization.

14 May 2024

23

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

Structural basis of hierarchical multiple substates of a protein. IV: Rearrangements in atom packing and local deformations

14 May 2024

25

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

Crystalline ribonuclease A loses function below the dynamical transition at 220 K

14 May 2024

27

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

14 May 2024

28

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

An all atom force field for simulations of proteins and nucleic acids

14 May 2024

32

1 reference

https://api.crossref.org/works/10.1002/PRO.5560030608

14 May 2024

Identifiers

1 reference

8 November 2017

1 reference

8 November 2017

1 reference

PMCID

2142881