(Q42859247)

8 November 2017

Messenger RNA degradation is initiated at the 5' end and follows sequence- and condition-dependent modes in chloroplasts (English)

1 reference

8 November 2017

Maria L Salvador

1

1 reference

8 November 2017

Loreto Suay

series ordinal

2

1 reference

8 November 2017

Uwe Klein

series ordinal

3

1 reference

8 November 2017

language of work or name

English

0 references

publication date

20 April 2011

1 reference

8 November 2017

Nucleic Acids Research

1 reference

8 November 2017

39

1 reference

8 November 2017

14

1 reference

8 November 2017

6213-6222

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

8 November 2017

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein

1 reference

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Function of chloroplast RNA-binding proteins

27 May 2018

1 reference

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Chloroplast RNA metabolism

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Site-specific binding of a PPR protein defines and stabilizes 5' and 3' mRNA termini in chloroplasts

27 May 2018

1 reference

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UNAFold: software for nucleic acid folding and hybridization

27 May 2018

1 reference

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A 125 kDa RNase E/G-like protein is present in plastids and is essential for chloroplast development and autotrophic growth in Arabidopsis.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

The RNase E/G-type endoribonuclease of higher plants is located in the chloroplast and cleaves RNA similarly to the E. coli enzyme

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

27 May 2018

1 reference

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Pentatricopeptide repeat proteins and their emerging roles in plants.

27 May 2018

1 reference

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5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Evidence for regulatory function of nucleus-encoded factors on mRNA stabilization and translation in the chloroplast

27 May 2018

1 reference

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Degradation of RNA in bacteria: comparison of mRNA and stable RNA

27 May 2018

1 reference

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Specific roles of 5' RNA secondary structures in stabilizing transcripts in chloroplasts

27 May 2018

1 reference

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Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.

27 May 2018

1 reference

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Cooperation of endo- and exoribonucleases in chloroplast mRNA turnover

27 May 2018

1 reference

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Changes in the 5'-untranslated region of the rbcL gene accelerate transcript degradation more than 50-fold in the chloroplast of Chlamydomonas reinhardtii

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Chloroplast RNA-binding proteins.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Specific sequence elements in the 5' untranslated regions of rbcL and atpB gene mRNas stabilize transcripts in the chloroplast of Chlamydomonas reinhardtii

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Gene elements that affect the longevity of rbcL sequence-containing transcripts in Chlamydomonas reinhardtii chloroplasts

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

The redox state regulates RNA degradation in the chloroplast of Chlamydomonas reinhardtii

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Small cis-acting sequences that specify secondary structures in a chloroplast mRNA are essential for RNA stability and translation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

5' to 3' exoribonucleolytic activity is a normal component of chloroplast mRNA decay pathways

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

5' sequences are important positive and negative determinants of the longevity of Chlamydomonas chloroplast gene transcripts

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Determinants for stability of the chloroplast psbD RNA are located within its short leader region in Chlamydomonas reinhardtii

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Activity of the Chlamydomonas chloroplast rbcL gene promoter is enhanced by a remote sequence element

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Control of RNase E-mediated RNA degradation by 5'-terminal base pairing in E. coli

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

MRL1, a conserved Pentatricopeptide repeat protein, is required for stabilization of rbcL mRNA in Chlamydomonas and Arabidopsis.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Polyadenylation in Arabidopsis and Chlamydomonas organelles: the input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Identifying and characterizing substrates of the RNase E/G family of enzymes.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Synthesis of the D2 protein of photosystem II in Chlamydomonas is controlled by a high molecular mass complex containing the RNA stabilization factor Nac2 and the translational activator RBP40.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Distinct roles for the 5' and 3' untranslated regions in the degradation and accumulation of chloroplast tufA mRNA: identification of an early intermediate in the in vivo degradation pathway.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Functional in vivo analyses of the 3' flanking sequences of the Chlamydomonas chloroplast rbcL and psaB genes.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Studies on Chlamydomonas chloroplast transformation: foreign DNA can be stably maintained in the chromosome

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152361

Chloroplast RNA-binding and pentatricopeptide repeat proteins

16 August 2018

1 reference

12 December 2020

Chloroplast transformation in Chlamydomonas with high velocity microprojectiles

1 reference

12 December 2020

Stress induction and developmental regulation of a rice chitinase promoter in transgenic tobacco

1 reference

12 December 2020

Redundant cis-acting determinants of 3' processing and RNA stability in the chloroplast rbcL mRNA of Chlamydomonas

1 reference

12 December 2020

An mRNA 3' processing site targets downstream sequences for rapid degradation in Chlamydomonas chloroplasts

1 reference

12 December 2020

Light-regulated and endogenous fluctuations of chloroplast transcript levels in Chlamydomonas. Regulation by transcription and RNA degradation

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKR226

1 reference

8 November 2017

1 reference

8 November 2017

1 reference