(Q42874087)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

title

Global gene expression analysis of Aspergillus nidulans reveals metabolic shift and transcription suppression under hypoxia (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

Putative TATA-binding protein

14 February 2020

main subject

0 references

Ortholog(s) have RNA polymerase II transcription factor activity, TBP-class protein binding RNA activity and role in regulation of transcription from RNA polymerase II promoter, transcription initiation from RNA polymerase II promoter

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Putative pyruvate decarboxylase with a predicted role in pyruvate metabolism or penicillin biosynthesis

0 references

Putative succinate-semialdehyde dehydrogenase [NAD(P)+] with a predicted role in 4-aminobutyrate (GABA) shunt

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Ortholog(s) have phosphopentomutase activity, role in guanosine catabolic process, inosine catabolic process, purine ribonucleoside salvage and cytosol, nucleus localization

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Putative NADP-linked glutamate dehydrogenase

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succinate dehydrogenase (ubiquinone), putative

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Putative phosphoglycerate mutase with a predicted role in gluconeogenesis and glycolysis

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Putative fumarate dehydratase with a predicted role in the TCA cycle

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Putative glucokinase

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glyceraldehyde-3-phosphate dehydrogenase

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citrate synthase, mitochondrial

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Putative succinate-semialdehyde dehydrogenase [NAD(P)+] with a predicted role in the 4-aminobutyrate (GABA) shunt

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Putative succinate-CoA ligase (ADP-forming) with a predicted role in the TCA cycle

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NAD-dependent glutamate dehydrogenase

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Hexokinase

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Putative glucose-6-phosphate isomerase with a predicted role in gluconeogenesis and glycolysis

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Putative alcohol dehydrogenase

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Putative triose-phosphate isomerase with a predicted role in glycolysis

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L-lactate dehydrogenase, putative

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malate dehydrogenase, putative

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malate dehydrogenase, putative

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Putative triose-phosphate isomerase with a predicted role in gluconeogenesis and glycolysis

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Putative phosphoglycerate kinase with a predicted role in gluconeogenesis and glycolysis

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Putative succinate-CoA ligase (GDP-forming), alpha chain

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Putative isocitrate dehydrogenase (NAD+) with a predicted role in the TCA cycle

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Putative succinate dehydrogenase

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Aldehyde dehydrogenase

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TFIID and SAGA complex TAF10 subunit

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putative oxidoreductase

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Ortholog(s) have RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly, TBP-class protein binding activity

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4-aminobutyrate aminotransferase, putative

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putative alcohol dehydrogenase III

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Putative succinate-CoA ligase (GDP-forming) with a predicted role in the TCA cycle

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Putative succinate dehydrogenase with a predicted role in the TCA cycle

0 references

ATP-citrate synthase, putative

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ATP-citrate synthase, putative

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Dihydrolipoyllysine-residue succinyltransferase, putative

0 references

6-phosphofructokinase, putative

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Putative aldose 1-epimerase with a predicted role in glucose metabolism

0 references

Putative phosphoglycerate mutase with a predicted role in gluconeogenesis and glycolysis

0 references

isocitrate dehydrogenase (NADP+), putative

0 references

Putative succinate dehydrogenase with a predicted role in the TCA cycle

0 references

fructose-bisphosphate aldolase, putative

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Putative phosphoglucomutase with a predicted role in carbohydrate metabolism

0 references

Putative pyruvate kinase with a predicted role in gluconeogenesis and glycolysis

0 references

Putative isocitrate dehydrogenase (NAD+) with a predicted role in the TCA cycle

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Putative enolase

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Fructose-1,6-bisphosphatase

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Putative saccharopine dehydrogenase (NADP+, L-glutamate-forming) with a predicted role in lysine metabolism

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2-oxoglutarate dehydrogenase, mitochondrial, putative

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aconitate hydratase

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Ortholog(s) have nucleolus, transcription factor TFIIE complex localization

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Putative glutamate decarboxylase with a predicted role in 4-aminobutyrate (GABA) shunt

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Putative aconitate hydratase with a predicted role in the TCA cycle

0 references

1 reference

Aspergillus nidulans

1 reference

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

author name string

Shunsuke Masuo

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Yasunobu Terabayashi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Motoyuki Shimizu

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Tatsuya Kitazume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Naoki Takaya

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

publication date

28 September 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

Molecular Genetics and Genomics

14 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

volume

284

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

page(s)

415-424

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20878186%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s00438-010-0576-x

14 February 2020

exact match

0 references

cites work

Architecture of a yeast U6 RNA gene promoter

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00438-010-0576-X

Oxygen sensing and molecular adaptation to hypoxia

21 January 2018

1 reference

12 December 2020

Nucleotide sequence and regulation of expression of the Aspergillus nidulans gdhA gene encoding NADP dependent glutamate dehydrogenase

1 reference

12 December 2020

Transcriptional response of the obligatory aerobe Trichoderma reesei to hypoxia and transient anoxia: implications for energy production and survival in the absence of oxygen.

1 reference

12 December 2020

Effects of a transition from normoxia to anoxia on yeast cytochrome c oxidase and the mitochondrial respiratory chain: implications for hypoxic gene induction

1 reference

12 December 2020

Biodiversity and evolution of primary carbon metabolism in Aspergillus nidulans and other Aspergillus spp.

1 reference

12 December 2020

Ammonia fermentation, a novel anoxic metabolism of nitrate by fungi

1 reference

12 December 2020

Alcohol dehydrogenase III in Aspergillus nidulans is anaerobically induced and post-transcriptionally regulated.

1 reference

12 December 2020

Wild-type and mutant stocks of Aspergillus nidulans

1 reference

12 December 2020

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

1 reference

12 December 2020

A hierarchical unsupervised growing neural network for clustering gene expression patterns

1 reference

12 December 2020

Oxygen requirement for denitrification by the fungus Fusarium oxysporum

1 reference

12 December 2020

Regulation of gene expression by oxygen in Saccharomyces cerevisiae

1 reference

12 December 2020

RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination

1 reference

12 December 2020

Multivariate analysis of microarray data by principal component discriminant analysis: prioritizing relevant transcripts linked to the degradation of different carbohydrates in Pseudomonas putida S12.

1 reference

12 December 2020

The RET1 gene of yeast encodes the second-largest subunit of RNA polymerase III. Structural analysis of the wild-type and ret1-1 mutant alleles.

1 reference

12 December 2020

Proteomic analysis of Aspergillus nidulans cultured under hypoxic conditions

1 reference

12 December 2020

Transcriptional response of Candida albicans to hypoxia: linkage of oxygen sensing and Efg1p-regulatory networks

1 reference

12 December 2020

Functional profiling of the Saccharomyces cerevisiae genome

1 reference

12 December 2020

Fungal ammonia fermentation, a novel metabolic mechanism that couples the dissimilatory and assimilatory pathways of both nitrate and ethanol. Role of acetyl CoA synthetase in anaerobic ATP synthesis

1 reference

12 December 2020

Transcriptional control of gluconeogenesis in Aspergillus nidulans

1 reference

12 December 2020

Retardation of chemical hypoxia-induced necrotic cell death by Bcl-2 and ICE inhibitors: possible involvement of common mediators in apoptotic and necrotic signal transductions.

1 reference

12 December 2020

An ion-pairing high-performance liquid chromatographic method for the direct simultaneous determination of nucleotides, deoxynucleotides, nicotinic coenzymes, oxypurines, nucleosides, and bases in perchloric acid cell extracts.

1 reference

12 December 2020

Intracellular metabolite profiling of Fusarium oxysporum converting glucose to ethanol

1 reference

12 December 2020

Molecular genetics of the RNA polymerase II general transcriptional machinery

1 reference

12 December 2020

The influence of different cultivation conditions on the metabolome of Fusarium oxysporum

1 reference

12 December 2020

The production of a new tempeh-like fermented soybean containing a high level of gamma-aminobutyric acid by anaerobic incubation with Rhizopus

1 reference

12 December 2020

The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels

1 reference

12 December 2020

A link between virulence and homeostatic responses to hypoxia during infection by the human fungal pathogen Cryptococcus neoformans

1 reference

12 December 2020

RPC40, a unique gene for a subunit shared between yeast RNA polymerases A and C.

1 reference

12 December 2020

Analysis of Aspergillus nidulans metabolism at the genome-scale

1 reference

12 December 2020

Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Rox1 and other factors in mediating the anoxic response.

1 reference

12 December 2020

Mechanism of de novo branched-chain amino acid synthesis as an alternative electron sink in hypoxic Aspergillus nidulans cells

1 reference

12 December 2020

Physiology of Aspergillus niger in oxygen-limited continuous cultures: Influence of aeration, carbon source concentration and dilution rate

1 reference

12 December 2020

Dual role of the C34 subunit of RNA polymerase III in transcription initiation.

1 reference

12 December 2020