(Q43121044)

14 November 2017

Modeling interactions between adjacent nucleosomes improves genome-wide predictions of nucleosome occupancy (English)

1 reference

14 November 2017

2

1 reference

14 November 2017

Shai Lubliner

1

1 reference

PMC publication ID

2687970

14 November 2017

language of work or name

English

0 references

publication date

1 June 2009

1 reference

14 November 2017

1 reference

14 November 2017

25

1 reference

14 November 2017

12

1 reference

14 November 2017

i348-55

1 reference

The DNA-encoded nucleosome organization of a eukaryotic genome

14 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Preferentially quantized linker DNA lengths in Saccharomyces cerevisiae

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Genomic sequence is highly predictive of local nucleosome depletion

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

A charged and contoured surface on the nucleosome regulates chromatin compaction

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

A high-resolution atlas of nucleosome occupancy in yeast

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Nucleosome positioning signals in genomic DNA

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

A genomic code for nucleosome positioning

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Nucleosome arrays reveal the two-start organization of the chromatin fiber

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Dinucleosome DNA of human K562 cells: experimental and computational characterizations.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Crystal structure of the nucleosome core particle at 2.8 A resolution

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Nucleosome DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Sequence periodicities in chicken nucleosome core DNA.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Three sequence rules for chromatin

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Yeast nucleosome DNA pattern: deconvolution from genome sequences of S. cerevisiae.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687970

Short-range order in two eukaryotic genomes: relation to chromosome structure

15 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19478009

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nucleosome positions predicted through comparative genomics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19478009

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTP216

1 reference

journals/bioinformatics/LublinerS09

14 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

2687970

14 November 2017

PubMed publication ID

19478009

1 reference

PMC publication ID

2687970