(Q43212597)

English

Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification.

scientific article published on 26 May 2008

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scholarly article

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Karl-Henrik Larsson

5

object named as

Karl-Henrik Larsson

1 reference

Europe PubMed Central

16 November 2017

3

object named as

Martin Ryberg

1 reference

Europe PubMed Central

16 November 2017

Rolf Henrik Nilsson

1

object named as

R Henrik Nilsson

1 reference

Europe PubMed Central

16 November 2017

author name string

Erik Kristiansson

2

1 reference

Europe PubMed Central

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21 January 2020

Nils Hallenberg

4

1 reference

Europe PubMed Central

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21 January 2020

R Henrik Nilsson

1

1 reference

Europe PubMed Central

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21 January 2020

Martin Ryberg

3

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Karl-Henrik Larsson

5

1 reference

Europe PubMed Central

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21 January 2020

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publication date

26 May 2008

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21 January 2020

Evolutionary Bioinformatics

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

4

1 reference

Europe PubMed Central

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21 January 2020

193-201

1 reference

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21 January 2020

maintained by WikiProject

WikiProject Ecology

1 reference

based on heuristic

inferred from title

Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota).

1 reference

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A higher-level phylogenetic classification of the Fungi

1 reference

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25 May 2018

Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha).

1 reference

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25 May 2018

Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants

1 reference

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25 May 2018

Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case.

1 reference

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25 May 2018

Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

1 reference

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25 May 2018

Reconstructing the early evolution of Fungi using a six-gene phylogeny

1 reference

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25 May 2018

Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions

1 reference

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25 May 2018

A 'dirty' business: testing the limitations of terminal restriction fragment length polymorphism (TRFLP) analysis of soil fungi.

1 reference

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25 May 2018

Internal transcribed spacer sequencing versus biochemical profiling for identification of medically important yeasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies

1 reference

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25 May 2018

The perils of DNA barcoding and the need for integrative taxonomy

1 reference

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25 May 2018

Defining operational taxonomic units using DNA barcode data

1 reference

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25 May 2018

An oligonucleotide barcode for species identification in Trichoderma and Hypocrea

1 reference

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25 May 2018

Approaching the taxonomic affiliation of unidentified sequences in public databases--an example from the mycorrhizal fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Assessment of ribosomal large-subunit D1-D2, internal transcribed spacer 1, and internal transcribed spacer 2 regions as targets for molecular identification of medically important Aspergillus species

1 reference

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25 May 2018

UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi

1 reference

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25 May 2018

Detection of plot-level changes in ectomycorrhizal communities across years in an old-growth mixed-conifer forest

1 reference

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25 May 2018

High phylogenetic diversity among corticioid homobasidiomycetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Taxonomic triage and the poverty of phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Ribosomal ITS sequences and plant phylogenetic inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, Fungi

1 reference

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25 May 2018

Seasonal dynamics of previously unknown fungal lineages in tundra soils.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Biological identifications through DNA barcodes

1 reference

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25 May 2018

What are bacterial species?

1 reference

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25 May 2018

Utilization of the internal transcribed spacer regions as molecular targets to detect and identify human fungal pathogens

1 reference

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25 May 2018

Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts

1 reference

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25 May 2018

The molecular revolution in ectomycorrhizal ecology: peeking into the black-box.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Phylogenetic species recognition and species concepts in fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Identification of Aspergillus species using internal transcribed spacer regions 1 and 2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Developments in fungal taxonomy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Profile hidden Markov models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Deep-level diagnostic value of the rDNA-ITS region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

25 May 2018

Ribosomal DNA: Molecular Evolution and Phylogenetic Inference

1 reference

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1 reference

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15 August 2018

Intra-specific and intra-sporocarp ITS variation of ectomycorrhizal fungi as assessed by rDNA sequencing of sporocarps and pooled ectomycorrhizal roots from a Quercus woodland

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

15 August 2018

Mutation model for nucleotide sequences based on crystal basis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

15 August 2018

Inter- and intraspecific resolution of nrDNA TRFLP assessed by computer-simulated restriction analysis of a diverse collection of ectomycorrhizal fungi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

15 August 2018

galaxie--CGI scripts for sequence identification through automated phylogenetic analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

15 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2614188

15 August 2018

TrichoBLAST: a multilocus database for Trichoderma and Hypocrea identifications

1 reference

https://pubmed.ncbi.nlm.nih.gov/19204817

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/19204817

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preserving Accuracy in GenBank

1 reference

https://pubmed.ncbi.nlm.nih.gov/19204817

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.4137/EBO.S653

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19204817%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

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