(Q44223561)

1 December 2017

title

Reticulate evolution of the rye genome (English)

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Thomas Schmutzer

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Eva Bauer

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Eva Bauer

series ordinal

14

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Mihaela M Martis

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object named as

Mihaela M Martis

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2

Ruonan Zhou

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3

Grit Haseneyer

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6

Marie Kubaláková

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10

Bernd Hackauf

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11

Viktor Korzun

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12

Chris-Carolin Schön

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Karl G Kugler

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Susanne König

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1 December 2017

publication date

8 October 2013

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volume

25

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issue

10

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1 December 2017

page(s)

3685-3698

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A universal reference karyotype in rye, Secale cereale L.

1 December 2017

cites work

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27 August 2018

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27 August 2018

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27 August 2018

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A high density consensus map of rye (Secale cereale L.) based on DArT markers

27 August 2018

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27 August 2018

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27 August 2018

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Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives

27 August 2018

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Interpretation of karyotype evolution should consider chromosome structural constraints

27 August 2018

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27 August 2018

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Unlocking the barley genome by chromosomal and comparative genomics

27 August 2018

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Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries.

27 August 2018

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Evolution of polyploid triticum wheats under cultivation: the role of domestication, natural hybridization and allopolyploid speciation in their diversification

27 August 2018

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Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution.

27 August 2018

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Reticulate evolutionary history of a complex group of grasses: phylogeny of Elymus StStHH allotetraploids based on three nuclear genes

27 August 2018

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FastTree 2--approximately maximum-likelihood trees for large alignments

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Genome sequencing and analysis of the model grass Brachypodium distachyon

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Development and implementation of high-throughput SNP genotyping in barley

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Gene content and virtual gene order of barley chromosome 1H.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Circos: an information aesthetic for comparative genomics

27 August 2018

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The Sorghum bicolor genome and the diversification of grasses

27 August 2018

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A consensus map of rye integrating mapping data from five mapping populations

27 August 2018

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27 August 2018

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27 August 2018

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Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley

27 August 2018

1 reference

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Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution

27 August 2018

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27 August 2018

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Cytogenetics and genome analysis in Brassica crops

27 August 2018

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A 1,000-loci transcript map of the barley genome: new anchoring points for integrative grass genomics

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Hybridization as an invasion of the genome

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Pvclust: an R package for assessing the uncertainty in hierarchical clustering.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

The map-based sequence of the rice genome

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

OrfPredictor: predicting protein-coding regions in EST-derived sequences

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Updating the 'crop circle'.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Approaching the self-incompatibility locus Z in rye (Secale cereale L.) via comparative genetics.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

MUSCLE: multiple sequence alignment with high accuracy and high throughput

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Reticulate evolution, introgression, and intertribal gene capture in an allohexaploid grass

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Genetic introgression as a potential to widen a species' niche: insights from alpine Carex curvula

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Analysis and sorting of rye (Secale cereale L.) chromosomes using flow cytometry.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Major ecological transitions in wild sunflowers facilitated by hybridization

27 August 2018

1 reference

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Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Nuclear DNA content and genome size of trout and human

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

The impact of polyploidy on grass genome evolution

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

MapChart: software for the graphical presentation of linkage maps and QTLs

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Phylogenetic analysis of the acetyl-CoA carboxylase and 3-phosphoglycerate kinase loci in wheat and other grasses

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Map Manager QTX, cross-platform software for genetic mapping

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

27 August 2018

B-chromosome evolution

1 reference

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Cereal Genome Evolution: Grasses, line up and form a circle

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Genomic mapping by fingerprinting random clones: a mathematical analysis

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

Basic local alignment search tool

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

The evolution of nuclear genome structure in seed plants

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3877785

A high-density transcript linkage map of barley derived from a single population

1 December 2018

1 reference

12 December 2020

Nonhomoeologous translocations between group 4, 5 and 7 chromosomes within wheat and rye

1 reference

12 December 2020

Chromosomal rearrangements in the rye genome relative to that of wheat

1 reference

12 December 2020

Comparative mapping of DNA sequences in rye (Secale cereale L.) in relation to the rice genome

1 reference

12 December 2020

Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.113.114553

1 reference

1 December 2017

0 references

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